mirror of
https://github.com/PiBrewing/craftbeerpi4.git
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1017 lines
31 KiB
Python
1017 lines
31 KiB
Python
from datetime import datetime
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from io import StringIO
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import numpy as np
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import pytest
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import pandas as pd
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from pandas import DataFrame, Index, MultiIndex, Series, bdate_range
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import pandas._testing as tm
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def test_apply_issues():
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# GH 5788
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s = """2011.05.16,00:00,1.40893
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2011.05.16,01:00,1.40760
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2011.05.16,02:00,1.40750
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2011.05.16,03:00,1.40649
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2011.05.17,02:00,1.40893
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2011.05.17,03:00,1.40760
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2011.05.17,04:00,1.40750
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2011.05.17,05:00,1.40649
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2011.05.18,02:00,1.40893
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2011.05.18,03:00,1.40760
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2011.05.18,04:00,1.40750
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2011.05.18,05:00,1.40649"""
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df = pd.read_csv(
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StringIO(s),
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header=None,
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names=["date", "time", "value"],
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parse_dates=[["date", "time"]],
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)
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df = df.set_index("date_time")
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expected = df.groupby(df.index.date).idxmax()
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result = df.groupby(df.index.date).apply(lambda x: x.idxmax())
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tm.assert_frame_equal(result, expected)
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# GH 5789
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# don't auto coerce dates
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df = pd.read_csv(StringIO(s), header=None, names=["date", "time", "value"])
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exp_idx = pd.Index(
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["2011.05.16", "2011.05.17", "2011.05.18"], dtype=object, name="date"
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)
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expected = Series(["00:00", "02:00", "02:00"], index=exp_idx)
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result = df.groupby("date").apply(lambda x: x["time"][x["value"].idxmax()])
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tm.assert_series_equal(result, expected)
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def test_apply_trivial():
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# GH 20066
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# trivial apply: ignore input and return a constant dataframe.
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df = pd.DataFrame(
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{"key": ["a", "a", "b", "b", "a"], "data": [1.0, 2.0, 3.0, 4.0, 5.0]},
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columns=["key", "data"],
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)
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expected = pd.concat([df.iloc[1:], df.iloc[1:]], axis=1, keys=["float64", "object"])
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result = df.groupby([str(x) for x in df.dtypes], axis=1).apply(
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lambda x: df.iloc[1:]
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)
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tm.assert_frame_equal(result, expected)
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@pytest.mark.xfail(
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reason="GH#20066; function passed into apply "
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"returns a DataFrame with the same index "
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"as the one to create GroupBy object."
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)
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def test_apply_trivial_fail():
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# GH 20066
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# trivial apply fails if the constant dataframe has the same index
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# with the one used to create GroupBy object.
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df = pd.DataFrame(
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{"key": ["a", "a", "b", "b", "a"], "data": [1.0, 2.0, 3.0, 4.0, 5.0]},
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columns=["key", "data"],
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)
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expected = pd.concat([df, df], axis=1, keys=["float64", "object"])
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result = df.groupby([str(x) for x in df.dtypes], axis=1).apply(lambda x: df)
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tm.assert_frame_equal(result, expected)
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def test_fast_apply():
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# make sure that fast apply is correctly called
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# rather than raising any kind of error
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# otherwise the python path will be callsed
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# which slows things down
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N = 1000
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labels = np.random.randint(0, 2000, size=N)
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labels2 = np.random.randint(0, 3, size=N)
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df = DataFrame(
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{
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"key": labels,
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"key2": labels2,
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"value1": np.random.randn(N),
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"value2": ["foo", "bar", "baz", "qux"] * (N // 4),
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}
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)
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def f(g):
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return 1
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g = df.groupby(["key", "key2"])
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grouper = g.grouper
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splitter = grouper._get_splitter(g._selected_obj, axis=g.axis)
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group_keys = grouper._get_group_keys()
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sdata = splitter._get_sorted_data()
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values, mutated = splitter.fast_apply(f, sdata, group_keys)
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assert not mutated
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@pytest.mark.parametrize(
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"df, group_names",
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[
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(DataFrame({"a": [1, 1, 1, 2, 3], "b": ["a", "a", "a", "b", "c"]}), [1, 2, 3]),
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(DataFrame({"a": [0, 0, 1, 1], "b": [0, 1, 0, 1]}), [0, 1]),
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(DataFrame({"a": [1]}), [1]),
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(DataFrame({"a": [1, 1, 1, 2, 2, 1, 1, 2], "b": range(8)}), [1, 2]),
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(DataFrame({"a": [1, 2, 3, 1, 2, 3], "two": [4, 5, 6, 7, 8, 9]}), [1, 2, 3]),
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(
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DataFrame(
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{
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"a": list("aaabbbcccc"),
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"B": [3, 4, 3, 6, 5, 2, 1, 9, 5, 4],
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"C": [4, 0, 2, 2, 2, 7, 8, 6, 2, 8],
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}
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),
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["a", "b", "c"],
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),
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(DataFrame([[1, 2, 3], [2, 2, 3]], columns=["a", "b", "c"]), [1, 2]),
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],
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ids=[
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"GH2936",
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"GH7739 & GH10519",
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"GH10519",
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"GH2656",
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"GH12155",
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"GH20084",
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"GH21417",
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],
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)
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def test_group_apply_once_per_group(df, group_names):
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# GH2936, GH7739, GH10519, GH2656, GH12155, GH20084, GH21417
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# This test should ensure that a function is only evaluated
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# once per group. Previously the function has been evaluated twice
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# on the first group to check if the Cython index slider is safe to use
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# This test ensures that the side effect (append to list) is only triggered
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# once per group
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names = []
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# cannot parameterize over the functions since they need external
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# `names` to detect side effects
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def f_copy(group):
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# this takes the fast apply path
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names.append(group.name)
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return group.copy()
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def f_nocopy(group):
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# this takes the slow apply path
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names.append(group.name)
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return group
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def f_scalar(group):
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# GH7739, GH2656
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names.append(group.name)
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return 0
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def f_none(group):
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# GH10519, GH12155, GH21417
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names.append(group.name)
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return None
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def f_constant_df(group):
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# GH2936, GH20084
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names.append(group.name)
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return DataFrame({"a": [1], "b": [1]})
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for func in [f_copy, f_nocopy, f_scalar, f_none, f_constant_df]:
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del names[:]
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df.groupby("a").apply(func)
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assert names == group_names
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def test_group_apply_once_per_group2(capsys):
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# GH: 31111
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# groupby-apply need to execute len(set(group_by_columns)) times
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expected = 2 # Number of times `apply` should call a function for the current test
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df = pd.DataFrame(
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{
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"group_by_column": [0, 0, 0, 0, 1, 1, 1, 1],
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"test_column": ["0", "2", "4", "6", "8", "10", "12", "14"],
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},
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index=["0", "2", "4", "6", "8", "10", "12", "14"],
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)
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df.groupby("group_by_column").apply(lambda df: print("function_called"))
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result = capsys.readouterr().out.count("function_called")
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# If `groupby` behaves unexpectedly, this test will break
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assert result == expected
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@pytest.mark.xfail(reason="GH-34998")
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def test_apply_fast_slow_identical():
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# GH 31613
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df = DataFrame({"A": [0, 0, 1], "b": range(3)})
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# For simple index structures we check for fast/slow apply using
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# an identity check on in/output
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def slow(group):
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return group
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def fast(group):
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return group.copy()
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fast_df = df.groupby("A").apply(fast)
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slow_df = df.groupby("A").apply(slow)
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tm.assert_frame_equal(fast_df, slow_df)
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@pytest.mark.parametrize(
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"func",
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[
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lambda x: x,
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pytest.param(lambda x: x[:], marks=pytest.mark.xfail(reason="GH-34998")),
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lambda x: x.copy(deep=False),
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pytest.param(
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lambda x: x.copy(deep=True), marks=pytest.mark.xfail(reason="GH-34998")
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),
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],
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)
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def test_groupby_apply_identity_maybecopy_index_identical(func):
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# GH 14927
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# Whether the function returns a copy of the input data or not should not
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# have an impact on the index structure of the result since this is not
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# transparent to the user
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df = pd.DataFrame({"g": [1, 2, 2, 2], "a": [1, 2, 3, 4], "b": [5, 6, 7, 8]})
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result = df.groupby("g").apply(func)
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tm.assert_frame_equal(result, df)
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def test_apply_with_mixed_dtype():
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# GH3480, apply with mixed dtype on axis=1 breaks in 0.11
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df = DataFrame(
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{
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"foo1": np.random.randn(6),
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"foo2": ["one", "two", "two", "three", "one", "two"],
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}
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)
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result = df.apply(lambda x: x, axis=1).dtypes
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expected = df.dtypes
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tm.assert_series_equal(result, expected)
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# GH 3610 incorrect dtype conversion with as_index=False
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df = DataFrame({"c1": [1, 2, 6, 6, 8]})
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df["c2"] = df.c1 / 2.0
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result1 = df.groupby("c2").mean().reset_index().c2
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result2 = df.groupby("c2", as_index=False).mean().c2
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tm.assert_series_equal(result1, result2)
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def test_groupby_as_index_apply(df):
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# GH #4648 and #3417
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df = DataFrame(
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{
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"item_id": ["b", "b", "a", "c", "a", "b"],
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"user_id": [1, 2, 1, 1, 3, 1],
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"time": range(6),
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}
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)
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g_as = df.groupby("user_id", as_index=True)
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g_not_as = df.groupby("user_id", as_index=False)
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res_as = g_as.head(2).index
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res_not_as = g_not_as.head(2).index
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exp = Index([0, 1, 2, 4])
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tm.assert_index_equal(res_as, exp)
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tm.assert_index_equal(res_not_as, exp)
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res_as_apply = g_as.apply(lambda x: x.head(2)).index
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res_not_as_apply = g_not_as.apply(lambda x: x.head(2)).index
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# apply doesn't maintain the original ordering
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# changed in GH5610 as the as_index=False returns a MI here
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exp_not_as_apply = MultiIndex.from_tuples([(0, 0), (0, 2), (1, 1), (2, 4)])
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tp = [(1, 0), (1, 2), (2, 1), (3, 4)]
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exp_as_apply = MultiIndex.from_tuples(tp, names=["user_id", None])
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tm.assert_index_equal(res_as_apply, exp_as_apply)
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tm.assert_index_equal(res_not_as_apply, exp_not_as_apply)
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ind = Index(list("abcde"))
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df = DataFrame([[1, 2], [2, 3], [1, 4], [1, 5], [2, 6]], index=ind)
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res = df.groupby(0, as_index=False).apply(lambda x: x).index
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tm.assert_index_equal(res, ind)
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def test_apply_concat_preserve_names(three_group):
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grouped = three_group.groupby(["A", "B"])
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def desc(group):
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result = group.describe()
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result.index.name = "stat"
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return result
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def desc2(group):
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result = group.describe()
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result.index.name = "stat"
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result = result[: len(group)]
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# weirdo
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return result
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def desc3(group):
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result = group.describe()
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# names are different
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result.index.name = f"stat_{len(group):d}"
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result = result[: len(group)]
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# weirdo
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return result
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result = grouped.apply(desc)
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assert result.index.names == ("A", "B", "stat")
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result2 = grouped.apply(desc2)
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assert result2.index.names == ("A", "B", "stat")
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result3 = grouped.apply(desc3)
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assert result3.index.names == ("A", "B", None)
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def test_apply_series_to_frame():
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def f(piece):
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with np.errstate(invalid="ignore"):
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logged = np.log(piece)
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return DataFrame(
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{"value": piece, "demeaned": piece - piece.mean(), "logged": logged}
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)
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dr = bdate_range("1/1/2000", periods=100)
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ts = Series(np.random.randn(100), index=dr)
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grouped = ts.groupby(lambda x: x.month)
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result = grouped.apply(f)
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assert isinstance(result, DataFrame)
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tm.assert_index_equal(result.index, ts.index)
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def test_apply_series_yield_constant(df):
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result = df.groupby(["A", "B"])["C"].apply(len)
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assert result.index.names[:2] == ("A", "B")
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def test_apply_frame_yield_constant(df):
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# GH13568
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result = df.groupby(["A", "B"]).apply(len)
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assert isinstance(result, Series)
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assert result.name is None
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result = df.groupby(["A", "B"])[["C", "D"]].apply(len)
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assert isinstance(result, Series)
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assert result.name is None
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def test_apply_frame_to_series(df):
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grouped = df.groupby(["A", "B"])
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result = grouped.apply(len)
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expected = grouped.count()["C"]
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tm.assert_index_equal(result.index, expected.index)
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tm.assert_numpy_array_equal(result.values, expected.values)
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def test_apply_frame_concat_series():
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def trans(group):
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return group.groupby("B")["C"].sum().sort_values()[:2]
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def trans2(group):
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grouped = group.groupby(df.reindex(group.index)["B"])
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return grouped.sum().sort_values()[:2]
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df = DataFrame(
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{
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"A": np.random.randint(0, 5, 1000),
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"B": np.random.randint(0, 5, 1000),
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"C": np.random.randn(1000),
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}
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)
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result = df.groupby("A").apply(trans)
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exp = df.groupby("A")["C"].apply(trans2)
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tm.assert_series_equal(result, exp, check_names=False)
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assert result.name == "C"
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def test_apply_transform(ts):
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grouped = ts.groupby(lambda x: x.month)
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result = grouped.apply(lambda x: x * 2)
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expected = grouped.transform(lambda x: x * 2)
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tm.assert_series_equal(result, expected)
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def test_apply_multikey_corner(tsframe):
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grouped = tsframe.groupby([lambda x: x.year, lambda x: x.month])
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def f(group):
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return group.sort_values("A")[-5:]
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result = grouped.apply(f)
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for key, group in grouped:
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tm.assert_frame_equal(result.loc[key], f(group))
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def test_apply_chunk_view():
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# Low level tinkering could be unsafe, make sure not
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df = DataFrame({"key": [1, 1, 1, 2, 2, 2, 3, 3, 3], "value": range(9)})
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result = df.groupby("key", group_keys=False).apply(lambda x: x[:2])
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expected = df.take([0, 1, 3, 4, 6, 7])
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tm.assert_frame_equal(result, expected)
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def test_apply_no_name_column_conflict():
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df = DataFrame(
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{
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"name": [1, 1, 1, 1, 1, 1, 2, 2, 2, 2],
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"name2": [0, 0, 0, 1, 1, 1, 0, 0, 1, 1],
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"value": range(9, -1, -1),
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}
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)
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# it works! #2605
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grouped = df.groupby(["name", "name2"])
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grouped.apply(lambda x: x.sort_values("value", inplace=True))
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def test_apply_typecast_fail():
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df = DataFrame(
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{
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"d": [1.0, 1.0, 1.0, 2.0, 2.0, 2.0],
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"c": np.tile(["a", "b", "c"], 2),
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"v": np.arange(1.0, 7.0),
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}
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)
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def f(group):
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v = group["v"]
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group["v2"] = (v - v.min()) / (v.max() - v.min())
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return group
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result = df.groupby("d").apply(f)
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expected = df.copy()
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expected["v2"] = np.tile([0.0, 0.5, 1], 2)
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tm.assert_frame_equal(result, expected)
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def test_apply_multiindex_fail():
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index = MultiIndex.from_arrays([[0, 0, 0, 1, 1, 1], [1, 2, 3, 1, 2, 3]])
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df = DataFrame(
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{
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"d": [1.0, 1.0, 1.0, 2.0, 2.0, 2.0],
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"c": np.tile(["a", "b", "c"], 2),
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"v": np.arange(1.0, 7.0),
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},
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index=index,
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)
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def f(group):
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|
v = group["v"]
|
|
group["v2"] = (v - v.min()) / (v.max() - v.min())
|
|
return group
|
|
|
|
result = df.groupby("d").apply(f)
|
|
|
|
expected = df.copy()
|
|
expected["v2"] = np.tile([0.0, 0.5, 1], 2)
|
|
|
|
tm.assert_frame_equal(result, expected)
|
|
|
|
|
|
def test_apply_corner(tsframe):
|
|
result = tsframe.groupby(lambda x: x.year).apply(lambda x: x * 2)
|
|
expected = tsframe * 2
|
|
tm.assert_frame_equal(result, expected)
|
|
|
|
|
|
def test_apply_without_copy():
|
|
# GH 5545
|
|
# returning a non-copy in an applied function fails
|
|
|
|
data = DataFrame(
|
|
{
|
|
"id_field": [100, 100, 200, 300],
|
|
"category": ["a", "b", "c", "c"],
|
|
"value": [1, 2, 3, 4],
|
|
}
|
|
)
|
|
|
|
def filt1(x):
|
|
if x.shape[0] == 1:
|
|
return x.copy()
|
|
else:
|
|
return x[x.category == "c"]
|
|
|
|
def filt2(x):
|
|
if x.shape[0] == 1:
|
|
return x
|
|
else:
|
|
return x[x.category == "c"]
|
|
|
|
expected = data.groupby("id_field").apply(filt1)
|
|
result = data.groupby("id_field").apply(filt2)
|
|
tm.assert_frame_equal(result, expected)
|
|
|
|
|
|
@pytest.mark.parametrize("test_series", [True, False])
|
|
def test_apply_with_duplicated_non_sorted_axis(test_series):
|
|
# GH 30667
|
|
df = pd.DataFrame(
|
|
[["x", "p"], ["x", "p"], ["x", "o"]], columns=["X", "Y"], index=[1, 2, 2]
|
|
)
|
|
if test_series:
|
|
ser = df.set_index("Y")["X"]
|
|
result = ser.groupby(level=0).apply(lambda x: x)
|
|
|
|
# not expecting the order to remain the same for duplicated axis
|
|
result = result.sort_index()
|
|
expected = ser.sort_index()
|
|
tm.assert_series_equal(result, expected)
|
|
else:
|
|
result = df.groupby("Y").apply(lambda x: x)
|
|
|
|
# not expecting the order to remain the same for duplicated axis
|
|
result = result.sort_values("Y")
|
|
expected = df.sort_values("Y")
|
|
tm.assert_frame_equal(result, expected)
|
|
|
|
|
|
def test_apply_reindex_values():
|
|
# GH: 26209
|
|
# reindexing from a single column of a groupby object with duplicate indices caused
|
|
# a ValueError (cannot reindex from duplicate axis) in 0.24.2, the problem was
|
|
# solved in #30679
|
|
values = [1, 2, 3, 4]
|
|
indices = [1, 1, 2, 2]
|
|
df = pd.DataFrame(
|
|
{"group": ["Group1", "Group2"] * 2, "value": values}, index=indices
|
|
)
|
|
expected = pd.Series(values, index=indices, name="value")
|
|
|
|
def reindex_helper(x):
|
|
return x.reindex(np.arange(x.index.min(), x.index.max() + 1))
|
|
|
|
# the following group by raised a ValueError
|
|
result = df.groupby("group").value.apply(reindex_helper)
|
|
tm.assert_series_equal(expected, result)
|
|
|
|
|
|
def test_apply_corner_cases():
|
|
# #535, can't use sliding iterator
|
|
|
|
N = 1000
|
|
labels = np.random.randint(0, 100, size=N)
|
|
df = DataFrame(
|
|
{
|
|
"key": labels,
|
|
"value1": np.random.randn(N),
|
|
"value2": ["foo", "bar", "baz", "qux"] * (N // 4),
|
|
}
|
|
)
|
|
|
|
grouped = df.groupby("key")
|
|
|
|
def f(g):
|
|
g["value3"] = g["value1"] * 2
|
|
return g
|
|
|
|
result = grouped.apply(f)
|
|
assert "value3" in result
|
|
|
|
|
|
def test_apply_numeric_coercion_when_datetime():
|
|
# In the past, group-by/apply operations have been over-eager
|
|
# in converting dtypes to numeric, in the presence of datetime
|
|
# columns. Various GH issues were filed, the reproductions
|
|
# for which are here.
|
|
|
|
# GH 15670
|
|
df = pd.DataFrame(
|
|
{"Number": [1, 2], "Date": ["2017-03-02"] * 2, "Str": ["foo", "inf"]}
|
|
)
|
|
expected = df.groupby(["Number"]).apply(lambda x: x.iloc[0])
|
|
df.Date = pd.to_datetime(df.Date)
|
|
result = df.groupby(["Number"]).apply(lambda x: x.iloc[0])
|
|
tm.assert_series_equal(result["Str"], expected["Str"])
|
|
|
|
# GH 15421
|
|
df = pd.DataFrame(
|
|
{"A": [10, 20, 30], "B": ["foo", "3", "4"], "T": [pd.Timestamp("12:31:22")] * 3}
|
|
)
|
|
|
|
def get_B(g):
|
|
return g.iloc[0][["B"]]
|
|
|
|
result = df.groupby("A").apply(get_B)["B"]
|
|
expected = df.B
|
|
expected.index = df.A
|
|
tm.assert_series_equal(result, expected)
|
|
|
|
# GH 14423
|
|
def predictions(tool):
|
|
out = pd.Series(index=["p1", "p2", "useTime"], dtype=object)
|
|
if "step1" in list(tool.State):
|
|
out["p1"] = str(tool[tool.State == "step1"].Machine.values[0])
|
|
if "step2" in list(tool.State):
|
|
out["p2"] = str(tool[tool.State == "step2"].Machine.values[0])
|
|
out["useTime"] = str(tool[tool.State == "step2"].oTime.values[0])
|
|
return out
|
|
|
|
df1 = pd.DataFrame(
|
|
{
|
|
"Key": ["B", "B", "A", "A"],
|
|
"State": ["step1", "step2", "step1", "step2"],
|
|
"oTime": ["", "2016-09-19 05:24:33", "", "2016-09-19 23:59:04"],
|
|
"Machine": ["23", "36L", "36R", "36R"],
|
|
}
|
|
)
|
|
df2 = df1.copy()
|
|
df2.oTime = pd.to_datetime(df2.oTime)
|
|
expected = df1.groupby("Key").apply(predictions).p1
|
|
result = df2.groupby("Key").apply(predictions).p1
|
|
tm.assert_series_equal(expected, result)
|
|
|
|
|
|
def test_apply_aggregating_timedelta_and_datetime():
|
|
# Regression test for GH 15562
|
|
# The following groupby caused ValueErrors and IndexErrors pre 0.20.0
|
|
|
|
df = pd.DataFrame(
|
|
{
|
|
"clientid": ["A", "B", "C"],
|
|
"datetime": [np.datetime64("2017-02-01 00:00:00")] * 3,
|
|
}
|
|
)
|
|
df["time_delta_zero"] = df.datetime - df.datetime
|
|
result = df.groupby("clientid").apply(
|
|
lambda ddf: pd.Series(
|
|
dict(clientid_age=ddf.time_delta_zero.min(), date=ddf.datetime.min())
|
|
)
|
|
)
|
|
expected = pd.DataFrame(
|
|
{
|
|
"clientid": ["A", "B", "C"],
|
|
"clientid_age": [np.timedelta64(0, "D")] * 3,
|
|
"date": [np.datetime64("2017-02-01 00:00:00")] * 3,
|
|
}
|
|
).set_index("clientid")
|
|
|
|
tm.assert_frame_equal(result, expected)
|
|
|
|
|
|
def test_time_field_bug():
|
|
# Test a fix for the following error related to GH issue 11324 When
|
|
# non-key fields in a group-by dataframe contained time-based fields
|
|
# that were not returned by the apply function, an exception would be
|
|
# raised.
|
|
|
|
df = pd.DataFrame({"a": 1, "b": [datetime.now() for nn in range(10)]})
|
|
|
|
def func_with_no_date(batch):
|
|
return pd.Series({"c": 2})
|
|
|
|
def func_with_date(batch):
|
|
return pd.Series({"b": datetime(2015, 1, 1), "c": 2})
|
|
|
|
dfg_no_conversion = df.groupby(by=["a"]).apply(func_with_no_date)
|
|
dfg_no_conversion_expected = pd.DataFrame({"c": 2}, index=[1])
|
|
dfg_no_conversion_expected.index.name = "a"
|
|
|
|
dfg_conversion = df.groupby(by=["a"]).apply(func_with_date)
|
|
dfg_conversion_expected = pd.DataFrame(
|
|
{"b": datetime(2015, 1, 1), "c": 2}, index=[1]
|
|
)
|
|
dfg_conversion_expected.index.name = "a"
|
|
|
|
tm.assert_frame_equal(dfg_no_conversion, dfg_no_conversion_expected)
|
|
tm.assert_frame_equal(dfg_conversion, dfg_conversion_expected)
|
|
|
|
|
|
def test_gb_apply_list_of_unequal_len_arrays():
|
|
|
|
# GH1738
|
|
df = DataFrame(
|
|
{
|
|
"group1": ["a", "a", "a", "b", "b", "b", "a", "a", "a", "b", "b", "b"],
|
|
"group2": ["c", "c", "d", "d", "d", "e", "c", "c", "d", "d", "d", "e"],
|
|
"weight": [1.1, 2, 3, 4, 5, 6, 2, 4, 6, 8, 1, 2],
|
|
"value": [7.1, 8, 9, 10, 11, 12, 8, 7, 6, 5, 4, 3],
|
|
}
|
|
)
|
|
df = df.set_index(["group1", "group2"])
|
|
df_grouped = df.groupby(level=["group1", "group2"], sort=True)
|
|
|
|
def noddy(value, weight):
|
|
out = np.array(value * weight).repeat(3)
|
|
return out
|
|
|
|
# the kernel function returns arrays of unequal length
|
|
# pandas sniffs the first one, sees it's an array and not
|
|
# a list, and assumed the rest are of equal length
|
|
# and so tries a vstack
|
|
|
|
# don't die
|
|
df_grouped.apply(lambda x: noddy(x.value, x.weight))
|
|
|
|
|
|
def test_groupby_apply_all_none():
|
|
# Tests to make sure no errors if apply function returns all None
|
|
# values. Issue 9684.
|
|
test_df = DataFrame({"groups": [0, 0, 1, 1], "random_vars": [8, 7, 4, 5]})
|
|
|
|
def test_func(x):
|
|
pass
|
|
|
|
result = test_df.groupby("groups").apply(test_func)
|
|
expected = DataFrame()
|
|
tm.assert_frame_equal(result, expected)
|
|
|
|
|
|
def test_groupby_apply_none_first():
|
|
# GH 12824. Tests if apply returns None first.
|
|
test_df1 = DataFrame({"groups": [1, 1, 1, 2], "vars": [0, 1, 2, 3]})
|
|
test_df2 = DataFrame({"groups": [1, 2, 2, 2], "vars": [0, 1, 2, 3]})
|
|
|
|
def test_func(x):
|
|
if x.shape[0] < 2:
|
|
return None
|
|
return x.iloc[[0, -1]]
|
|
|
|
result1 = test_df1.groupby("groups").apply(test_func)
|
|
result2 = test_df2.groupby("groups").apply(test_func)
|
|
index1 = MultiIndex.from_arrays([[1, 1], [0, 2]], names=["groups", None])
|
|
index2 = MultiIndex.from_arrays([[2, 2], [1, 3]], names=["groups", None])
|
|
expected1 = DataFrame({"groups": [1, 1], "vars": [0, 2]}, index=index1)
|
|
expected2 = DataFrame({"groups": [2, 2], "vars": [1, 3]}, index=index2)
|
|
tm.assert_frame_equal(result1, expected1)
|
|
tm.assert_frame_equal(result2, expected2)
|
|
|
|
|
|
def test_groupby_apply_return_empty_chunk():
|
|
# GH 22221: apply filter which returns some empty groups
|
|
df = pd.DataFrame(dict(value=[0, 1], group=["filled", "empty"]))
|
|
groups = df.groupby("group")
|
|
result = groups.apply(lambda group: group[group.value != 1]["value"])
|
|
expected = pd.Series(
|
|
[0],
|
|
name="value",
|
|
index=MultiIndex.from_product(
|
|
[["empty", "filled"], [0]], names=["group", None]
|
|
).drop("empty"),
|
|
)
|
|
tm.assert_series_equal(result, expected)
|
|
|
|
|
|
def test_apply_with_mixed_types():
|
|
# gh-20949
|
|
df = pd.DataFrame({"A": "a a b".split(), "B": [1, 2, 3], "C": [4, 6, 5]})
|
|
g = df.groupby("A")
|
|
|
|
result = g.transform(lambda x: x / x.sum())
|
|
expected = pd.DataFrame({"B": [1 / 3.0, 2 / 3.0, 1], "C": [0.4, 0.6, 1.0]})
|
|
tm.assert_frame_equal(result, expected)
|
|
|
|
result = g.apply(lambda x: x / x.sum())
|
|
tm.assert_frame_equal(result, expected)
|
|
|
|
|
|
def test_func_returns_object():
|
|
# GH 28652
|
|
df = DataFrame({"a": [1, 2]}, index=pd.Int64Index([1, 2]))
|
|
result = df.groupby("a").apply(lambda g: g.index)
|
|
expected = Series(
|
|
[pd.Int64Index([1]), pd.Int64Index([2])], index=pd.Int64Index([1, 2], name="a")
|
|
)
|
|
|
|
tm.assert_series_equal(result, expected)
|
|
|
|
|
|
@pytest.mark.parametrize(
|
|
"group_column_dtlike",
|
|
[datetime.today(), datetime.today().date(), datetime.today().time()],
|
|
)
|
|
def test_apply_datetime_issue(group_column_dtlike):
|
|
# GH-28247
|
|
# groupby-apply throws an error if one of the columns in the DataFrame
|
|
# is a datetime object and the column labels are different from
|
|
# standard int values in range(len(num_columns))
|
|
|
|
df = pd.DataFrame({"a": ["foo"], "b": [group_column_dtlike]})
|
|
result = df.groupby("a").apply(lambda x: pd.Series(["spam"], index=[42]))
|
|
|
|
expected = pd.DataFrame(
|
|
["spam"], Index(["foo"], dtype="object", name="a"), columns=[42]
|
|
)
|
|
tm.assert_frame_equal(result, expected)
|
|
|
|
|
|
def test_apply_series_return_dataframe_groups():
|
|
# GH 10078
|
|
tdf = DataFrame(
|
|
{
|
|
"day": {
|
|
0: pd.Timestamp("2015-02-24 00:00:00"),
|
|
1: pd.Timestamp("2015-02-24 00:00:00"),
|
|
2: pd.Timestamp("2015-02-24 00:00:00"),
|
|
3: pd.Timestamp("2015-02-24 00:00:00"),
|
|
4: pd.Timestamp("2015-02-24 00:00:00"),
|
|
},
|
|
"userAgent": {
|
|
0: "some UA string",
|
|
1: "some UA string",
|
|
2: "some UA string",
|
|
3: "another UA string",
|
|
4: "some UA string",
|
|
},
|
|
"userId": {
|
|
0: "17661101",
|
|
1: "17661101",
|
|
2: "17661101",
|
|
3: "17661101",
|
|
4: "17661101",
|
|
},
|
|
}
|
|
)
|
|
|
|
def most_common_values(df):
|
|
return Series({c: s.value_counts().index[0] for c, s in df.iteritems()})
|
|
|
|
result = tdf.groupby("day").apply(most_common_values)["userId"]
|
|
expected = pd.Series(
|
|
["17661101"], index=pd.DatetimeIndex(["2015-02-24"], name="day"), name="userId"
|
|
)
|
|
tm.assert_series_equal(result, expected)
|
|
|
|
|
|
@pytest.mark.parametrize("category", [False, True])
|
|
def test_apply_multi_level_name(category):
|
|
# https://github.com/pandas-dev/pandas/issues/31068
|
|
b = [1, 2] * 5
|
|
if category:
|
|
b = pd.Categorical(b, categories=[1, 2, 3])
|
|
expected_index = pd.CategoricalIndex([1, 2], categories=[1, 2, 3], name="B")
|
|
else:
|
|
expected_index = pd.Index([1, 2], name="B")
|
|
df = pd.DataFrame(
|
|
{"A": np.arange(10), "B": b, "C": list(range(10)), "D": list(range(10))}
|
|
).set_index(["A", "B"])
|
|
result = df.groupby("B").apply(lambda x: x.sum())
|
|
expected = pd.DataFrame({"C": [20, 25], "D": [20, 25]}, index=expected_index)
|
|
tm.assert_frame_equal(result, expected)
|
|
assert df.index.names == ["A", "B"]
|
|
|
|
|
|
def test_groupby_apply_datetime_result_dtypes():
|
|
# GH 14849
|
|
data = pd.DataFrame.from_records(
|
|
[
|
|
(pd.Timestamp(2016, 1, 1), "red", "dark", 1, "8"),
|
|
(pd.Timestamp(2015, 1, 1), "green", "stormy", 2, "9"),
|
|
(pd.Timestamp(2014, 1, 1), "blue", "bright", 3, "10"),
|
|
(pd.Timestamp(2013, 1, 1), "blue", "calm", 4, "potato"),
|
|
],
|
|
columns=["observation", "color", "mood", "intensity", "score"],
|
|
)
|
|
result = data.groupby("color").apply(lambda g: g.iloc[0]).dtypes
|
|
expected = Series(
|
|
[np.dtype("datetime64[ns]"), object, object, np.int64, object],
|
|
index=["observation", "color", "mood", "intensity", "score"],
|
|
)
|
|
tm.assert_series_equal(result, expected)
|
|
|
|
|
|
@pytest.mark.parametrize(
|
|
"index",
|
|
[
|
|
pd.CategoricalIndex(list("abc")),
|
|
pd.interval_range(0, 3),
|
|
pd.period_range("2020", periods=3, freq="D"),
|
|
pd.MultiIndex.from_tuples([("a", 0), ("a", 1), ("b", 0)]),
|
|
],
|
|
)
|
|
def test_apply_index_has_complex_internals(index):
|
|
# GH 31248
|
|
df = DataFrame({"group": [1, 1, 2], "value": [0, 1, 0]}, index=index)
|
|
result = df.groupby("group").apply(lambda x: x)
|
|
tm.assert_frame_equal(result, df)
|
|
|
|
|
|
@pytest.mark.parametrize(
|
|
"function, expected_values",
|
|
[
|
|
(lambda x: x.index.to_list(), [[0, 1], [2, 3]]),
|
|
(lambda x: set(x.index.to_list()), [{0, 1}, {2, 3}]),
|
|
(lambda x: tuple(x.index.to_list()), [(0, 1), (2, 3)]),
|
|
(
|
|
lambda x: {n: i for (n, i) in enumerate(x.index.to_list())},
|
|
[{0: 0, 1: 1}, {0: 2, 1: 3}],
|
|
),
|
|
(
|
|
lambda x: [{n: i} for (n, i) in enumerate(x.index.to_list())],
|
|
[[{0: 0}, {1: 1}], [{0: 2}, {1: 3}]],
|
|
),
|
|
],
|
|
)
|
|
def test_apply_function_returns_non_pandas_non_scalar(function, expected_values):
|
|
# GH 31441
|
|
df = pd.DataFrame(["A", "A", "B", "B"], columns=["groups"])
|
|
result = df.groupby("groups").apply(function)
|
|
expected = pd.Series(expected_values, index=pd.Index(["A", "B"], name="groups"))
|
|
tm.assert_series_equal(result, expected)
|
|
|
|
|
|
def test_apply_function_returns_numpy_array():
|
|
# GH 31605
|
|
def fct(group):
|
|
return group["B"].values.flatten()
|
|
|
|
df = pd.DataFrame({"A": ["a", "a", "b", "none"], "B": [1, 2, 3, np.nan]})
|
|
|
|
result = df.groupby("A").apply(fct)
|
|
expected = pd.Series(
|
|
[[1.0, 2.0], [3.0], [np.nan]], index=pd.Index(["a", "b", "none"], name="A")
|
|
)
|
|
tm.assert_series_equal(result, expected)
|
|
|
|
|
|
@pytest.mark.parametrize(
|
|
"function", [lambda gr: gr.index, lambda gr: gr.index + 1 - 1],
|
|
)
|
|
def test_apply_function_index_return(function):
|
|
# GH: 22541
|
|
df = pd.DataFrame([1, 2, 2, 2, 1, 2, 3, 1, 3, 1], columns=["id"])
|
|
result = df.groupby("id").apply(function)
|
|
expected = pd.Series(
|
|
[pd.Index([0, 4, 7, 9]), pd.Index([1, 2, 3, 5]), pd.Index([6, 8])],
|
|
index=pd.Index([1, 2, 3], name="id"),
|
|
)
|
|
tm.assert_series_equal(result, expected)
|
|
|
|
|
|
def test_apply_function_with_indexing():
|
|
# GH: 33058
|
|
df = pd.DataFrame(
|
|
{"col1": ["A", "A", "A", "B", "B", "B"], "col2": [1, 2, 3, 4, 5, 6]}
|
|
)
|
|
|
|
def fn(x):
|
|
x.col2[x.index[-1]] = 0
|
|
return x.col2
|
|
|
|
result = df.groupby(["col1"], as_index=False).apply(fn)
|
|
expected = pd.Series(
|
|
[1, 2, 0, 4, 5, 0],
|
|
index=pd.MultiIndex.from_tuples(
|
|
[(0, 0), (0, 1), (0, 2), (1, 3), (1, 4), (1, 5)]
|
|
),
|
|
name="col2",
|
|
)
|
|
tm.assert_series_equal(result, expected)
|
|
|
|
|
|
def test_apply_function_with_indexing_return_column():
|
|
# GH: 7002
|
|
df = DataFrame(
|
|
{
|
|
"foo1": ["one", "two", "two", "three", "one", "two"],
|
|
"foo2": [1, 2, 4, 4, 5, 6],
|
|
}
|
|
)
|
|
result = df.groupby("foo1", as_index=False).apply(lambda x: x.mean())
|
|
expected = DataFrame({"foo1": ["one", "three", "two"], "foo2": [3.0, 4.0, 4.0]})
|
|
tm.assert_frame_equal(result, expected)
|
|
|
|
|
|
@pytest.mark.xfail(reason="GH-34998")
|
|
def test_apply_with_timezones_aware():
|
|
# GH: 27212
|
|
|
|
dates = ["2001-01-01"] * 2 + ["2001-01-02"] * 2 + ["2001-01-03"] * 2
|
|
index_no_tz = pd.DatetimeIndex(dates)
|
|
index_tz = pd.DatetimeIndex(dates, tz="UTC")
|
|
df1 = pd.DataFrame({"x": list(range(2)) * 3, "y": range(6), "t": index_no_tz})
|
|
df2 = pd.DataFrame({"x": list(range(2)) * 3, "y": range(6), "t": index_tz})
|
|
|
|
result1 = df1.groupby("x", group_keys=False).apply(lambda df: df[["x", "y"]].copy())
|
|
result2 = df2.groupby("x", group_keys=False).apply(lambda df: df[["x", "y"]].copy())
|
|
|
|
tm.assert_frame_equal(result1, result2)
|