From #xapian
olly> bremner: btw, i noticed notmuch count see ms to request all the documents and then ignores them
bremner> hmm. There's something funny about the way that notmuch uses matches in general iirc
olly> it should be able to do: mset = enquire.get_mset (0, 0, notmuch->xapian_db->get_doccount ());
...
olly> get_matches_estimated() will be exact because check_at_least is the size of the database
We already depend on glib both directly and indirectly (via gmime). We
might as well make use of its facilities. Drop the embedded libsha1
and use glib for sha1 digests.
The todo comment got separated from the status it's related to at
commit 3f32fd8a1c ("Add missing comment for
NOTMUCH_STATUS_READONLY_DATABASE."). Later, commit b65ca8e0ba ("lib:
modify notmuch.h for automatic document generation") moved it, but to
the wrong place. Fix the location.
It seems that no-one tried to compile without Xapian compact support
since March of 2015, since that's when I introduced a syntax error in
that branch of the ifdef.
Given the choice of maintaining this underused branch of code, or
bumping the Xapian dependency to a version from 2011, it seems
reasonable to do the latter.
This should not change the SONAME, and therefore won't change the
dynamic linking behaviour, but it may help some users debug missing
symbols in case their libnotmuch is too old.
This is needed so that when the map is modified during traversal, and
thus unlinked by the database code, the map is not disposed of until the
iterator is done with it.
We want to be able to query the properties directly, like:
notmuch count property:foo=bar
which should return a count of messages where the property with key
"foo" has value equal to "bar".
I believe the current one is misleading, because in my experiments
Xapian did not add : when prefix and term were both upper case. Indeed,
it's hard to see how it could, because prefixes are added at a layer
above Xapian in our code. See _notmuch_message_add_term for an example.
Also try to explain why this is a good idea. As far as I can ascertain,
this is more of an issue for a system trying to work with an unknown set
of prefixes. Since notmuch has a fixed set of prefixes, and we can
hopefully be trusted not to add XGOLD and XGOLDEN as prefixes, it is
harder for problems to arise.
_notmuch_database_log clears the log buffer each time. Rather than
introducing more complicated semantics about for this function, provide
a second function that does not clear the buffer. This is mainly a
convenience function for callers constructing complex or multi-line log
messages.
The changes to query.cc are to make sure that the common code path of
the new function is tested.
This support will be present only if the appropriate version of xapian
is available _and_ the user did not disable the feature when
building. So there really needs to be some way for the user to check.
Xapian 1.3 has introduced the DB_RETRY_LOCK flag (Xapian bug
275). Detect it in configure and optionally use it. With this flag
commands that need the write lock will wait for their turn instead of
aborting when it's not immediately available.
Amended by db: allow disabling in configure
Fix bug reported in id:20160606124522.g2y2eazhhrwjsa4h@flatcap.org
Although the C99 standard 6.10 is a little non-obvious on this point,
the docs for e.g. gcc are unambiguous. And indeed in practice with the
extra space, this code fails
#include <stdio.h>
#define foo (x) (x+1)
int main(int argc, char **argv){
printf("%d\n",foo(1));
}
Many of the external links found in the notmuch source can be resolved
using https instead of http. This changeset addresses as many as i
could find, without touching the e-mail corpus or expected outputs
found in tests.
Cleaned the following whitespace in lib/* files:
lib/index.cc: 1 line: trailing whitespace
lib/database.cc 5 lines: 8 spaces at the beginning of line
lib/notmuch-private.h: 4 lines: 8 spaces at the beginning of line
lib/message.cc: 1 line: trailing whitespace
lib/sha1.c: 1 line: empty lines at the end of file
lib/query.cc: 2 lines: 8 spaces at the beginning of line
lib/gen-version-script.sh: 1 line: trailing whitespace
It's already kindof gross that this is hardcoded in two different
places. We will also need these later in field processors calling back
into the query parser.
Since xapian provides the ability to restrict the iterator to a given
prefix, we expose this ability to the user. Otherwise we mimic the other
iterator interfances in notmuch (e.g. tags.c).
This is a thin wrapper around the Xapian metadata API. The job of this
layer is to keep the config key value pairs from colliding with other
metadata by transparently prefixing the keys, along with the usual glue
to provide a C interface.
The split of _get_config into two functions is to allow returning of the
return value with different memory ownership semantics.
To fully complete the ghost-on-removal-when-shared-thread-exists
proposal, we need to clear all ghost messages when the last active
message is removed from a thread.
Amended by db: Remove the last test of T530, as it no longer makes sense
if we are garbage collecting ghost messages.
There is no need to add a ghost message upon deletion if there are no
other active messages in the thread.
Also, if the message being deleted was a ghost already, we can just go
ahead and delete it.
Publicly we are only exposing the non-ghost documents (of "type"
"mail"). But internally we might want to inspect the ghost messages
as well.
This changeset adds two new private interfaces to queries to recover
information about alternate document types.
implement ghost-on-removal, the solution to T590-thread-breakage.sh
that just adds a ghost message after removing each message.
It leaks information about whether we've ever seen a given message id,
but it's a fairly simple implementation.
Note that _resolve_message_id_to_thread_id already introduces new
message_ids to the database, so i think just searching for a given
message ID may introduce the same metadata leakage.
The code to skip multiple slashes in _notmuch_database_split_path()
skips back one character too much. This is compensated by a +1 in the
length parameter to the strndup() call. Mostly this works fine, but if
the path is to a file under a top level directory with one character
long name, the directory part is mistaken to be part of the file name
(slash == path in code). The returned directory name will be the empty
string and the basename will be the full path, breaking the indexing
logic in notmuch new.
Fix the multiple slash skipping to keep the slash variable pointing at
the last slash, and adjust strndup() accordingly.
The bug was introduced in
commit e890b0cf40
Author: Carl Worth <cworth@cworth.org>
Date: Sat Dec 19 13:20:26 2009 -0800
database: Store the parent ID for each directory document.
just a little over two months after the initial commit in the Notmuch
code history, making this the longest living bug in Notmuch to date.
Some compilers (older than gcc 4.5 and clang 2.9) do support
__attribute__ ((deprecated)) but not
__attribute__ ((deprecated("message"))).
Check if clang version is at least 3.0, or gcc version
is at least 4.5 to define NOTMUCH_DEPRECATED as the
latter variant above. Otherwise define NOTMUCH_DEPRECATED
as the former variant above.
For a bit simpler implementation clang 2.9 is not included
to use the newer variant. It is just one release, and the
older one works fine. Clang 3.0 was released around 2011-11
and gcc 5.1 2015-04-22 (therefore newer macro for gcc 4.5+)
We can't (but currently do) allow upgrades within transactions because
upgrades need their own transactions. We don't want to re-use the
current transaction because bailing out of an upgrade would mean loosing
all previous changes (because our "atomic" transactions don't commit
before hand). This gives us two options:
1. Fail at the beginning of upgrade (tell the user to end the
transaction, upgrade, and start over).
2. Don't allow the user to start the transaction.
I went with the latter because:
1. There is no reason to call `begin_atomic` unless you intend to to
write to the database and anyone intending to write to the database
should upgrade it first.
2. This means that nothing inside an atomic transaction can ever fail
with NOTMUCH_STATUS_UPGRADE_REQUIRED.
Per RFC 2183, the values for Content-Disposition values are not
case-sensitive. While at it, use the gmime function for getting at the
disposition string instead of referencing the field directly.
This fixes "attachment" tagging and filename term generation for
attachments while indexing.
Although I think it's a pretty bad idea to continue using the old API,
this allows both a more gentle transition for clients of the library,
and allows us to break one monolithic change into a series
It doesn't seem likely we can support simple date:<expr> expanding to
date:<expr>..<expr> any time soon. (This can be done with a future
version of Xapian, or with a custom query query parser.) In the mean
time, provide shorthand date:<expr>..! to mean the same. This is
useful, as the expansion takes place before interpetation, and we can
use, for example, date:yesterday..! to match from beginning of
yesterday to end of yesterday.
Idea from Mark Walters <markwalters1009@gmail.com>.
These functions are all just accessors, and it's pretty clear they don't
modify the query struct. This also fixes one warning I created when I
introduced status.c.
This exposes the committed database revision to library users along
with a UUID that can be used to detect when revision numbers are no
longer comparable (e.g., because the database has been replaced).
This adds a new document value that stores the revision of the last
modification to message metadata, where the revision number increases
monotonically with each database commit.
An alternative would be to store the wall-clock time of the last
modification of each message. In principle this is simpler and has
the advantage that any process can determine the current timestamp
without support from libnotmuch. However, even assuming a computer's
clock never goes backward and ignoring clock skew in networked
environments, this has a fatal flaw. Xapian uses (optimistic)
snapshot isolation, which means reads can be concurrent with writes.
Given this, consider the following time line with a write and two read
transactions:
write |-X-A--------------|
read 1 |---B---|
read 2 |---|
The write transaction modifies message X and records the wall-clock
time of the modification at A. The writer hangs around for a while
and later commits its change. Read 1 is concurrent with the write, so
it doesn't see the change to X. It does some query and records the
wall-clock time of its results at B. Transaction read 2 later starts
after the write commits and queries for changes since wall-clock time
B (say the reads are performing an incremental backup). Even though
read 1 could not see the change to X, read 2 is told (correctly) that
X has not changed since B, the time of the last read. In fact, X
changed before wall-clock time A, but the change was not visible until
*after* wall-clock time B, so read 2 misses the change to X.
This is tricky to solve in full-blown snapshot isolation, but because
Xapian serializes writes, we can use a simple, monotonically
increasing database revision number. Furthermore, maintaining this
revision number requires no more IO than a wall-clock time solution
because Xapian already maintains statistics on the upper (and lower)
bound of each value stream.
- Make lib/notmuch.h the canonical location for the library versioning
information.
- Since the release-check should never fail now, remove it to reduce
complexity.
- Make the version numbers in notmuch.h consistent with the (now
deleted) ones in lib/Makefile.local
The CLI (and bindings) code should really be updated to use the new
status-code-returning versions. Here are some warnings to prod us (and
other clients) to do so.
Previously, we updated the database copy of a message on every call to
_notmuch_message_sync, even if nothing had changed. In particular,
this always happens on a thaw, so a freeze/thaw pair with no
modifications between still caused a database update.
We only modify message documents in a handful of places, so keep track
of whether the document has been modified and only sync it when
necessary. This will be particularly important when we add message
revision tracking.
It turns out that on certain systems like FreeBSD, c++filt is not
installed by default. It's basically OK if we fail the build in that
case, but what's really not OK is for the build to continue and
generate bad binaries.
There are many places in the notmuch code where the path is assumed to be absolute. If someone (TM) wants a project, one could remove these assumptions. In the mean time, prevent users from shooting themselves in the foot.
Update test suite mark tests for this error as no longer broken, and
also convert some tests that used relative paths for nonexistent
directories.
The difference with FILE_ERROR is that this is for things that are
wrong with the path before looking at the disk.
Add some 3 tests; two broken as a reminder to actually use this new
code.
You may wonder why _notmuch_message_file_open_ctx has two parameters.
This is because we need sometime to use a ctx which is a
notmuch_message_t. While we could get the database from this, there is
no easy way in C to tell type we are getting.
This is not supposed to change any functionality from an end user
point of view. Note that it will eliminate some output to stderr. The
query debugging output is left as is; it doesn't really fit with the
current primitive logging model. The remaining "bad" fprintf will need
an internal API change.
The compatibility wrapper ensures that clients calling
notmuch_database_open will receive consistent output for now.
The changes to notmuch-{new,search} and test/symbol-test are just to
make the test suite pass.
The use of IGNORE_RESULT is justified by two things. 1) I don't know
what else to do. 2) asprintf guarantees the output string is NULL if
an error occurs, so at least we are not passing garbage back.
The default is actually exact if no checkatleast parameter is
specified. This change makes that explicit, mainly for documentation,
but also to be safe in the unlikely event of a change of default.
[ commit message rewritten by db based on id:87lho0nlkk.fsf@nikula.org
]
The install_name of libnotmuch.dylib on Mac OS X is what is written
into a program that links against it. If it is just the name of the
shared library file, as opposed to the full path, the program won't be
able to find it when it runs and will abort. Instead, the install_name
should be the full path to the shared library (in its final installed
location).
Why does Notmuch work without this patch when installed via Homebrew?
The answer is twofold. One, /usr/local/lib is a special location in
which the dynamic linker will look by default to find shared libraries.
Homebrew highly recommends installing to /usr/local, and, assuming it
has been configured this way, the Notmuch library will end up installed
in /usr/local/lib, and the dynamic linker will find it. Two, Homebrew
globally corrects all install names in dynamically shared libraries and
binaries for each package it installs. So, even if the install names in
a package's binaries and libraries are incorrect, Homebrew corrects them
automatically, and no one ever knows.
Why does Notmuch work without this patch when installed via MacPorts?
The answer is that MacPorts applies a patch just like this patch to fix
the same problem.
This indicates upwardly compatible changes, namely adding new symbols.
Although we don't formally need to do this until the next release,
there is no hard in doing it now, as long as we don't bump the minor
version for every addition between now and the release.
This at least allows distinguishing between out of memory and Xapian
exceptions. Adding finer grained status codes would allow different
Xapian exceptions to be preserved.
Adding wrappers allows people to transition gradually to the new API,
at the cost of bloating the library API a bit.
This adds the indexing support for the "mimetype:" term and removes
the broken test flag. The indexing is probablistic in Xapian terms,
which gives a better experience to end users. Standard content-types
of the form "foo/bar" are automatically interpreted as phrases in
Xapian due to the embedded slash.
Assume, separate messages with application/pdf and application/x-pdf
are indexed, then:
- mimetype:application/x-pdf will find only the application/x-pdf
- mimetype:application/pdf will find only the application/pdf
- mimetype:pdf will find both of the messages
This feature will exist in all newly created databases, but there is
no upgrade provided for it. If this flag exists, it indicates that
the database was created after the indexed MIME-types feature was
added.
_thread_set_subject_from_message sometimes replaces the subject, making the
cur_subject point to free'd memory
==6550== ERROR: AddressSanitizer: heap-use-after-free on address 0x601a0000bec0 at pc 0x4464a4 bp 0x7fffa40be910 sp 0x7fffa40be908
READ of size 1 at 0x601a0000bec0 thread T0
#0 0x4464a3 in _thread_add_matched_message /home/todd/.apps/notmuch/lib/thread.cc:369
#1 0x443c2c in notmuch_threads_get /home/todd/.apps/notmuch/lib/query.cc:496
#2 0x41d947 in do_search_threads /home/todd/.apps/notmuch/notmuch-search.c:131
#3 0x40a3fe in main /home/todd/.apps/notmuch/notmuch.c:345
#4 0x7f4e535b4ec4 in __libc_start_main /build/buildd/eglibc-2.19/csu/libc-start.c:287
#5 0x40abe6 in _start ??:?
0x601a0000bec0 is located 96 bytes inside of 134-byte region [0x601a0000be60,0x601a0000bee6)
freed by thread T0 here:
#0 0x7f4e54e6933a in __interceptor_free ??:?
#1 0x7f4e54482fab in _talloc_free ??:?
previously allocated by thread T0 here:
#0 0x7f4e54e6941a in malloc ??:?
#1 0x7f4e54485b5d in talloc_strdup ??:?
==22884== ERROR: AddressSanitizer: heap-buffer-overflow on address 0x601600008291 at pc 0x7ff6295680e5 bp 0x7fff4ab9aa40 sp 0x7fff4ab9aa08
READ of size 1 at 0x601600008291 thread T0
#0 0x7ff6295680e4 in __interceptor_strcmp ??:?
#1 0x44763b in _thread_add_message /home/todd/.apps/notmuch/lib/thread.cc:255
#2 0x4459e8 in notmuch_threads_get /home/todd/.apps/notmuch/lib/query.cc:496
#3 0x41e2a7 in do_search_threads /home/todd/.apps/notmuch/notmuch-search.c:131
#4 0x40a408 in main /home/todd/.apps/notmuch/notmuch.c:345
#5 0x7ff627cb9ec4 in __libc_start_main /build/buildd/eglibc-2.19/csu/libc-start.c:287
#6 0x40abf3 in _start ??:?
0x601600008291 is located 0 bytes to the right of 97-byte region [0x601600008230,0x601600008291)
allocated by thread T0 here:
#0 0x7ff62956e41a in malloc ??:?
#1 0x7ff628b8ab5d in talloc_strdup ??:?
Currently the thread is named based on either the oldest or newest
matching message (depending on the search order). If this message has
an empty subject, though, the thread will show up with an empty
subject in the search results. (See the thread starting with
`id:1412371140-21051-1-git-send-email-david@tethera.net` for an
example.)
This changes the behavior so it will use a non-empty name for the
thread if possible. We name threads based on (a) non-empty matches for
the query, and (b) the search order. If the search order is
oldest-first (as in the default inbox) it chooses the oldest matching
non-empty message as the subject. If the search order is newest-first
it chooses the newest one.
Tamas Szakaly points out [1] that the bug fixed in 51b073c still
exists in at least one place. This change follows the suggestion of
[2] and creates a block scope temporary std::string to avoid the rules
of iterators temporaries.
[1]: id:20141226113755.GA64154@pamparam
[2]: id:20141226230655.GA41992@pamparam
We generally do not support mbox files, but for historical reasons
we've supported single-message mbox files, with a deprecation
message. We've tried dropping the support altogether, but backed out
of it because we'd need to stop indexing them, while keeping support
for previously indexed files. This would be more complicated than
simply supporting single-message mbox files. Therefore, drop the
deprecation message, and just silently accept single-message mboxes.
Currently, if a From-header is of the form:
"" <address@example.com>
the empty string will be treated as a valid real-name, and the entry
in the search results will be empty.
The new behavior here is that we treat an empty real-name field as if
it were null, so that the email address will be used in the search
results instead.
Signed-off-by: Jesse Rosenthal <jrosenthal@jhu.edu>
Previously, it was necessary to link new messages to children to work
around some (though not all) problems with the old metadata-based
approach to stored thread IDs. With ghost messages, this is no longer
necessary, so don't bother with child linking when ghost messages are
in use.
This updates the thread linking code to use ghost messages instead of
user metadata to link messages into threads.
In contrast with the old approach, this is actually correct.
Previously, thread merging updated only the thread IDs of message
documents, not thread IDs stored in user metadata. As originally
diagnosed by Mark Walters [1] and as demonstrated by the broken
T260-thread-order test, this can cause notmuch to fail to link
messages even though they're in the same thread. In principle the old
approach could have been fixed by updating the user metadata thread
IDs as well, but these are not indexed and hence this would have
required a full scan of all stored thread IDs. Ghost messages solve
this problem naturally by reusing the exact same thread ID and message
ID representation and indexing as regular messages.
Furthermore, thanks to this greater symmetry, ghost messages are also
algorithmically simpler. We continue to support the old user metadata
format, so this patch can't delete any code, but when we do remove
support for the old format, several functions can simply be deleted.
[1] id:8738h7kv2q.fsf@qmul.ac.uk
This updates the message abstraction to support ghost messages: it
adds a message flag that distinguishes regular messages from ghost
messages, and an internal function for initializing a newly created
(blank) message as a ghost message.
In the interest of robustness, avoid undefined behavior of
sortable_unserialise if the date value is missing. This shouldn't
happen now, but ghost messages will have blank date values.
This moves the code to retrieve and clear the metadata thread ID out
of _notmuch_database_link_message into its own function. This will
simplify future changes.
Previously, this was performed by notmuch_database_add_message. This
happens to be the only caller currently (which is why this was safe),
but we're about to introduce more callers, and it makes more sense to
put responsibility for ID compression in the lower-level function
rather than requiring each caller to handle it.
In Xapian, closing a database implicitly aborts any outstanding
transaction and commits changes. For historical reasons,
notmuch_database_close had grown to almost, but not quite duplicate
this behavior. Before closing the database, it would explicitly (and
unnecessarily) commit it. However, if there was an outstanding
transaction (ie atomic section), commit would throw a Xapian
exception, which notmuch_database_close would unnecessarily print to
stderr, even though notmuch_database_close would ultimately abort the
transaction anyway when it called close.
This patch simplifies notmuch_database_close to explicitly abort any
outstanding transaction and then just call Database::close. This
works for both read-only and read/write databases, takes care of
committing changes, unifies the exception handling path, and codifies
aborting outstanding transactions. This is currently the only way to
abort an atomic section (and may remain so, since it would be
difficult to roll back things we may have cached from rolled-back
modifications).
as stated in thread.cc:115
/* Construct an authors string from matched_authors_array and
* authors_array. The string contains matched authors first, then
* non-matched authors (with the two groups separated by '|'). Within
* each group, authors are listed in date order. */
this is, however, not reflected in the public API documentation in
notmuch.h:970. This patch a paragraph explaining how | separates the
group of authors of messages matching the query and those of messages
that do not, but are still contained in the thread.
48db8c8 introduced a disagreement between when
notmuch_database_needs_upgrade returned TRUE and when
notmuch_database_upgrade actually performed an upgrade. As a result,
if a database had a version less than 3, but no new features were
required, notmuch new would call notmuch_database_upgrade to perform
an upgrade, but notmuch_database_upgrade would return immediately
without updating the database version. Hence, the next notmuch new
would do the same, and so on.
Fix this by ensuring that the upgrade-required logic is identical
between the two.
Previously, there was no protection against a caller invoking an
operation on an old database version that would effectively corrupt
the database by treating it like a newer version.
According to notmuch.h, any caller that opens the database in
read/write mode is supposed to check if the database needs upgrading
and perform an upgrade if it does. This would protect against this,
but nobody (even the CLI) actually does this.
However, with features, it's easy to protect against incompatible
operations on a fine-grained basis. This lightweight change allows
callers to safely operate on old database versions, while preventing
specific operations that would corrupt the database with an
informative error message.
Commit 567bcbc2 introduced support for storing various headers in
document values. However, doing so in a backwards-compatible way
meant that genuinely empty header values could not be distinguished
from the old behavior of not storing the headers at all, so these
required parsing the original message.
Now that we have database features, new databases can declare that all
messages have header values, so if we have this feature flag, we can
use the stored header value even if it's the empty string.
This requires slight cleanup to notmuch_message_get_header, since the
code previously couldn't distinguish between empty headers and headers
that are never stored in the database (previously this distinction
didn't matter).
Previously, some parts of upgrade didn't report progress and for
others it was possible for the progress meter to restart at 0 part way
through the upgrade because each stage was reported separately.
Fix this by computing the total amount of work that needs to be done
up-front and updating completed work monotonically.
Rather than potentially making multiple passes over the same type of
data in the database, reorganize upgrade around each type of data that
may be upgraded. This eliminates code duplication, will make
multi-version upgrades faster, and will let us improve progress
reporting.
Previously, we had database version information hard-coded in the
upgrade code. Slightly re-organize the upgrade process around the set
of new database features to be enabled by the upgrade.
Previously, the upgrade was organized as two passes -- an upgrade
pass, and a separate cleanup pass -- so the database was always in a
valid state. This change substantially simplifies this code by
performing the upgrade in a transaction and combining both passes in
to one. This 1) eliminates a lot of duplicate code between the
passes, 2) speeds up the upgrade process, 3) makes progress reporting
more accurate, 4) eliminates the potential for stale data if the
upgrade is interrupted during the cleanup pass, and 5) makes it easier
to reason about the safety of the upgrade code.
Previously, our database schema was versioned by a single number.
Each database schema change had to occur "atomically" in Notmuch's
development history: before some commit, Notmuch used version N, after
that commit, it used version N+1. Hence, each new schema version
could introduce only one change, the task of developing a schema
change fell on a single person, and it all had to happen and be
perfect in a single commit series. This made introducing a new schema
version hard. We've seen only two schema changes in the history of
Notmuch.
This commit introduces database schema version 3; hopefully the last
schema version we'll need for a while. With this version, we switch
from a single version number to "features": a set of named,
independent aspects of the database schema.
Features should make backwards compatibility easier. For many things,
it should be easy to support databases both with and without a
feature, which will allow us to make upgrades optional and will enable
"unstable" features that can be developed and tested over time.
Features also make forwards compatibility easier. The features
recorded in a database include "compatibility flags," which can
indicate to an older version of Notmuch when it must support a given
feature to open the database for read or for write. This lets us
replace the old vague "I don't recognize this version, so something
might go wrong, but I promise to try my best" warnings upon opening a
database with an unknown version with precise errors. If a database
is safe to open for read/write despite unknown features, an older
version will know that and issue no message at all. If the database
is not safe to open for read/write because of unknown features, an
older version will know that, too, and can tell the user exactly which
required features it lacks support for.
According to RFC2822 References and In-Reply-To headers are supposed
to contain one or more Message-IDs, however older RFC822 allowed
almost any content. When both References and In-Reply-To headers ends
with something else that a Message-ID (see e.g. [1]), the thread
structure presented by notmuch is incorrect. The reason is that
notmuch treats this case as if the email contained no "replyto"
information (see _notmuch_database_link_message_to_parents).
This patch changes the parse_references() function to return the last
valid Message-ID encountered rather than NULL resulting from the last
hunk of text not being the Message-ID.
[1] https://lkml.org/lkml/headers/2014/5/19/864
Previously, we invalidated stored message metadata in
_notmuch_message_add_term and _notmuch_message_remove_term, but not in
_notmuch_message_gen_terms. This doesn't currently result in any bugs
because of our limited uses of _notmuch_message_gen_terms, but it may
could cause trouble in the future.
As noted in devel/STYLE, every private library function should start
with _notmuch. This patch corrects function naming that did not adhere
to this style in lib/notmuch-private.h. In particular, the old function
names that now begin with _notmuch are
notmuch_sha1_of_file
notmuch_sha1_of_string
notmuch_message_file_close
notmuch_message_file_get_header
notmuch_message_file_open
notmuch_message_get_author
notmuch_message_set_author
Signed-off-by: Charles Celerier <cceleri@cs.stanford.edu>
notmuch_database_close may fail in Xapian ->flush() or ->close(), so
report the status. Similarly for notmuch_database_destroy which calls
close.
This is required for notmuch insert to report error status if message
indexing failed.
This adds a 100 termpos gap between all phrases indexed by
_notmuch_message_gen_terms. This fixes a bug where terms from the end
of one header and the beginning of another header could match together
in a single phrase and a separate bug where term positions of
un-prefixed terms overlapped.
This fix only affects newly indexed messages. Messages that are
already indexed won't benefit from this fix without re-indexing, but
the fix won't make things any worse for existing messages.
Previously, we indexed the name and address parts of from/to headers
with two calls to _notmuch_message_gen_terms. In general, this
indicates that these parts are separate phrases. However, because of
an implementation quirk, the two calls to _notmuch_message_gen_terms
generated adjacent term positions for the prefixed terms, which
happens to be the right thing to do in this case, but the wrong thing
to do for all other calls. Furthermore, _notmuch_message_gen_terms
produced potentially overlapping term positions for the un-prefixed
copies of the terms, which is simply wrong.
This change indexes both the name and address in a single call to
_notmuch_message_gen_terms, indicating that they should be part of a
single phrase. This masks the problem with the un-prefixed terms
(fixing the two known-broken tests) and puts us in a position to fix
the unintentionally phrases generated by other calls to
_notmuch_message_gen_terms.
This is effectively a revert of
commit 6812136bf5
Author: Jani Nikula <jani@nikula.org>
Date: Mon Mar 31 00:21:48 2014 +0300
lib: drop support for single-message mbox files
The intention was to drop support for indexing new single-message mbox
files (and whether that was a good idea in the first place is
arguable). However this inadvertently broke support for reading
headers from previously indexed single-message mbox files, which is
far worse.
Distinguishing between the two cases would require more code than
simply bringing back support for single-message mbox files.
The notmuch library includes a full blown message header parser. Yet
the same message headers are parsed by gmime during indexing. Switch
to gmime parsing completely.
These are the main changes:
* Gmime stops header parsing at the first invalid header, and presumes
the message body starts from there. The current parser is quite
liberal in accepting broken headers. The change means we will be
much pickier about accepting invalid messages.
* The current parser converts tabs used in header folding to
spaces. Gmime preserve the tabs. Due to a broken python library used
in mailman, there are plenty of mailing lists that produce headers
with tabs in header folding, and we'll see plenty of tabs. (This
change has been mitigated in preparatory patches.)
* For pure header parsing, the current parser is likely faster than
gmime, which parses the whole message rather than just the
headers. Since we parse the message and its headers using gmime for
indexing anyway, this avoids and extra header parsing round when
adding new messages. In case of duplicate messages, we'll end up
parsing the full message although just headers would be
sufficient. All in all this should still speed up 'notmuch new'.
* Calls to notmuch_message_get_header() may be slightly slower than
previously for headers that are not indexed in the database, due to
parsing of the whole message. Within the notmuch code base, notmuch
reply is the only such user.
We've supported mbox files containing a single message for historical
reasons, but the support has been deprecated, with a warning message
while indexing, since Notmuch 0.15. Finally drop the support, and
consider all mbox files non-email.
In xapian terms, convert folder: prefix from probabilistic to boolean
prefix, matching the paths, relative from the maildir root, of the
message files, ignoring the maildir new and cur leaf directories.
folder:foo matches all message files in foo, foo/new, and foo/cur.
folder:foo/new does *not* match message files in foo/new.
folder:"" matches all message files in the top level maildir and its
new and cur subdirectories.
This change constitutes a database change: bump the database version
and add database upgrade support for folder: terms. The upgrade also
adds path: terms.
Finally, fix the folder search test for literal folder: search, as
some of the folder: matching capabilities are lost in the
probabilistic to boolean prefix change.
The path: prefix is a literal boolean prefix matching the paths,
relative from the maildir root, of the message files.
path:foo matches all message files in foo (but not in foo/new or
foo/cur).
path:foo/new matches all message files in foo/new.
path:"" matches all message files in the top level maildir.
path:foo/** matches all message files in foo and recursively in all
subdirectories of foo.
path:** matches all message files recursively, i.e. all messages.
Clarify that using the directory after destroying the corresponding
database is not permitted.
This is implicit in the description of notmuch_database_destroy, but
it doesn't hurt to be explicit, and we do express similar "ownership"
relationships at other places in the docs.
Currently if a Xapian exception happens in notmuch_message_get_header,
the exception is not caught leading to crash. In
notmuch_message_get_date the exception is caught, but an internal error
is raised, again leading to crash.
This patch fixes the error handling by making both functions catch the
Xapian exceptions, print an error and return NULL or 0.
The 'notmuch->exception_reported' is also set, as is done elsewhere,
even if I don't really get the idea of that field.
Signed-off-by: Tomi Valkeinen <tomi.valkeinen@iki.fi>
With some combination of clang and talloc, not using the return value
of talloc_steal() produces a warning. Ignore it, as talloc_steal() has
no failure modes per documentation.
This version of the library introduces LIBNOTMUCH_CHECK_VERSION and
the *_VERSION macros. Bumping the version number is also necessary to
make the comment on LIBNOTMUCH_CHECK_VERSION no longer a lie.
This makes it clear that these macros refer to the *library* version,
and not to the notmuch application-level release. Since there are no
consumers of these macros yet, this is now or never.
We have two distinct "library version" numbers: the soname version and
the version macros. We need both for different reasons: the version
macros enable easy compile-time version detection (and conditional
compilation), while the soname version enables runtime version
detection (which includes the version checking done by things like the
Python bindings).
However, currently, these two version numbers are different, which is
unnecessary and can lead to confusion (especially in things like
Debian, which include the soname version in the package name). This
patch makes them the same by bumping the version macros up to agree
with the soname version.
(We should probably keep the version number in just one place so they
can't get out of sync, but that can be done in another patch.)
Unfortunately old versions of GCC and clang do not provide byte order
macros, so we re-invent them.
If UTIL_BYTE_ORDER is not defined or defined to 0, we fall back to
macros supported by recent versions of GCC and clang
Previously PLATFORM_BYTE_ORDER and IS_LITTLE_ENDIAN were not defined,
so the little endian code was always compiled in.
This will have the effect that the "SHA1s" on big endian architectures
will change (i.e. become actual sha1s). So someone re-indexing their
database could conceivable lose tags on messages without a message-id
header.
In case previous notmuch compact has been interrupted there is old
work-in-progress database compact directory partially filled. Remove
it just before starting to fill the directory with new files.
It is less error prone and window of failure opportunity is smaller
if the old (backup) database is always renamed (instead of sometimes
rmtree'd) before new (compacted) database is put into its place.
Finally rmtree() old database in case old database backup is not kept.
catch Xapian::Error in compact code in lib/database.cc to be consistent
with other code in addition to not making software crash on uncaught
other Xapian error.
There have been some plans for making build incompatible changes to
the library API. This is inconvenient, but it is much more so without
a way to easily conditional build against multiple versions of
notmuch.
The macro has been lifted from glib.
The extra path component added by the lib is a magic value that the
caller just has to know. This is demonstrated by the current code,
which indeed has "xapian.old" both sides of the interface. Use the
backup path provided by the lib caller verbatim, without adding
anything to it.
The queries don't really work after a database is closed, and we would
like them to be freed if the database is destroyed.
Acknowledged-by: David Bremner <david@tethera.net>
Signed-off-by: Felipe Contreras <felipe.contreras@gmail.com>
This function uses Xapian's Compactor machinery to compact the notmuch
database. The compacted database is built in a temporary directory and
later moved into place while the original uncompacted database is
preserved.
Signed-off-by: Ben Gamari <bgamari.foss@gmail.com>
As explained by Jeffrey Stedfast, the author of GMime, quoted in [1]:
> Passing the GMIME_ENABLE_RFC2047_WORKAROUNDS flag to g_mime_init()
> *should* solve the decoding problem mentioned in the thread. This
> flag should be safe to pass into g_mime_init() without any bad side
> effects and my unit tests do test that code-path.
The thread being referred to is [2].
[1] id:87bo56viyo.fsf@nikula.org
[2] id:08cb1dcd-c5db-4e33-8b09-7730cb3d59a2@gmail.com
notmuch_message_tags_to_maildir_flags() unconditionally moves messages from
maildir directory "new/" to maildir directory "cur/", which makes messages lose
their "new" status in the MUA. However some users want to keep this "new"
status after, for instance, an auto-tagging of new messages.
However, as Austin mentioned and according to the maildir specification,
messages living in "new/" are not allowed to have flags, even if mutt allows it
to happen. For this reason, this patch prevents moving messages from "new/" to
"cur/", only if no flags have to be changed. It's hopefully enough to satisfy
mutt (and maybe other MUAs showing the "new" status) users checking the "new"
status.
Changelog:
* v2: Fix bool type as well as NULL returned despite having no errors (Austin
Clements)
* v4: Tag the related test (contributed by Michal Sojka) as working
Signed-off-by: Louis Rilling <l.rilling@av7.net>
[Condition for keeping messages in new/ was extended to satisfy all
tests from the previous patch. -Michal Sojka]
[Added by David Bremner, to keep the tests passing at each commit]
update insert tests for new maildir synchronization rules
As of id:1355952747-27350-4-git-send-email-sojkam1@fel.cvut.cz
we are more conservative about moving messages from ./new to ./cur.
This updates the insert tests to match
Long story short, fix build on recent (3.2+) clang.
The long story for posterity follows.
gcc 4.6 added new warnings about structs with greater visibility than
their fields. The warnings were silenced by adjusting visibility in
commit d5523ead90
Author: Carl Worth <cworth@cworth.org>
Date: Wed May 11 13:23:13 2011 -0700
Mark some structures in the library interface with visibility=default attribute.
Later on,
commit 3b76adf9e2
Author: Austin Clements <amdragon@MIT.EDU>
Date: Sat Jan 14 19:17:33 2012 -0500
lib: Add support for automatically excluding tags from queries
changed visibility of struct _notmuch_string_list for the same reason, and
commit 1a53f9f116
Author: Mark Walters <markwalters1009@gmail.com>
Date: Thu Mar 1 22:30:38 2012 +0000
lib: Add the exclude flag to notmuch_query_search_threads
split the struct _notmuch_string_list and its typedef
notmuch_string_list_t as a way to make a forward declaration for
_notmuch_thread_create().
The subtle difference was that the struct definition now had 'visible'
in it, while the typedef didn't, and it was within the #pragma GCC
visibility push(hidden) block. This went unnoticed, as the then common
versions of clang didn't care about this.
A later change in clang (I did not dig into when this change was
introduced) caused the following error:
CXX -O2 lib/database.o
In file included from lib/database.cc:21:
In file included from ./lib/database-private.h:33:
./lib/notmuch-private.h:479:8: error: visibility does not match previous declaration
struct visible _notmuch_string_list {
^
./lib/notmuch-private.h:67:33: note: expanded from macro 'visible'
^
./lib/notmuch-private.h:52:13: note: previous attribute is here
^
1 error generated.
make: *** [lib/database.o] Error 1
This is slightly misleading due to the reference to the #pragma. The
real culprit is the typedef within the #pragma.
We could just add 'visible' to the typedef, or move the typedef
outside of the #pragma, and be done with it, but juggle the
declarations a bit to accommodate moving the typedef back with the
struct, and keep the visibility attribute in one place.
The problem was originally reported by Simonas Kazlauskas
<s@kazlauskas.me> in id:20130418102507.GA23688@godbox but I was only
able to reproduce and investigate now that I upgraded clang.
notmuch_message_get_header started returning some headers straight
from the database in 567bcbc, but this comment explicitly claimed all
headers were read from the message file.
Add NOTMUCH_EXCLUDE_FLAG to notmuch_exclude_t so that it can
cover all four values of search --exclude in the cli.
Previously the way to avoid any message being marked excluded was to
pass in an empty list of excluded tags: since we now have an explicit
option we might as well honour it.
The enum is in a slightly strange order as the existing FALSE/TRUE
options correspond to the new
NOTMUCH_EXCLUDE_FLAG/NOTMUCH_EXCLUDE_TRUE options so this means we do
not need to bump the version number.
Indeed, an example of this is that the cli count and show still use
FALSE/TRUE and still work.
Presently, the code which finds the parent of a message as it is being
added to the database assumes that the first Message-ID-like substring
of the In-Reply-To header is the parent Message ID. Some mail clients,
however, put stuff other than the Message-ID of the parent in the
In-Reply-To header, such as the email address of the sender of the
parent. This can fool notmuch.
The updated algorithm prefers the last Message ID in the References
header. The References header lists messages oldest-first, so the last
Message ID is the parent (RFC2822, p. 24). The References header is
also less likely to be in a non-standard
syntax (http://cr.yp.to/immhf/thread.html,
http://www.jwz.org/doc/threading.html). In case the References header
is not to be found, fall back to the old behavior.
V2 of this patch, incorporating feedback from Jani and (indirectly)
Austin.
Xapian::TermIterator::operator* returns std::string which is destroyed
as soon as (*i).c_str() finishes. The remembered pointer 'term' then
references invalid memory.
Signed-off-by: Vladimir Marek <vlmarek@volny.cz>
Notmuch automatically re-orders names of the format "Last, First" to
"First Last" when the associated email address is
First.Last@example.com. But, if a name is of the format "Last,First"
then notmuch will format the name as "irst Last". Handle any number of
spaces after the comma, including none.
Previously, getting the list of all messages in a thread required
recursively traversing the thread's message hierarchy, which was both
difficult and resulted in messages being out of order. This adds a
public function to retrieve an iterator over all of the messages in a
thread in oldest-first order.
Previously, thread.cc built up a list of all messages, then
proceeded to tear it apart to transform it into a list of
top-level messages. Now we simply build a new list of top-level
messages.
This simplifies the interface to _notmuch_message_add_reply,
eliminates the pointer acrobatics from
_resolve_thread_relationships, and will enable us to do things
with the list of all messages in the following patches.
Previously, there were various opportunities for memory leaks in the
error-handling paths of this function. Use a local talloc context and
some reparenting to make eliminate these leaks, while keeping the
control flow simple.
Using char instead of int allows for simpler definitions of the
DOCIDSET macros so the code is easier to understand and consistent with
respect to memory-usage. Estimated reduction of memory-usage for
bitmap about 8 times.
Apparently as of GMime 2.4, you don't need to call
internet_address_list_destroy anymore, but you still need to call
g_object_unref (from the GMime Changelog).
On the medium performance corpus, valgrind shows "possibly lost"
leakage in "notmuch new" dropping from 7M to 300k.
The message->headers hash table values get data returned by
g_mime_utils_header_decode_text ().
The pointer returned by g_mime_utils_header_decode_text is from the
following line in rfc2047_decode_tokens
return g_string_free (decoded, FALSE);
The docs for g_string_free say
Frees the memory allocated for the GString. If free_segment is TRUE
it also frees the character data. If it's FALSE, the caller gains
ownership of the buffer and must free it after use with g_free().
The remaining frees and allocations referencing to message->headers hash
values have been changed to use g_free and g_malloc functions.
This combines and completes the changes started by David Bremner.
Previously, we would treat multi-message mboxes as one giant email,
which, besides the obvious incorrect indexing, often led to
out-of-memory errors for archival mboxes. Now we explicitly reject
multi-message mboxes. For historical reasons, we retain support for
single-message mboxes, but official deprecate this behavior.
Add a custom value range processor to enable date and time searches of
the form date:since..until, where "since" and "until" are expressions
understood by the previously added date/time parser, to restrict the
results to messages within a particular time range (based on the Date:
header).
If "since" or "until" describes date/time at an accuracy of days or
less, the values are rounded according to the accuracy, towards past
for "since" and towards future for "until". For example,
date:november..yesterday would match from the beginning of November
until the end of yesterday. Expressions such as date:today..today
means since the beginning of today until the end of today.
Open-ended ranges are supported (since Xapian 1.2.1), i.e. you can
specify date:..until or date:since.. to not limit the start or end
date, respectively.
CAVEATS:
Xapian does not support spaces in range expressions. You can replace
the spaces with '_', or (in most cases) '-', or (in some cases) leave
the spaces out altogether.
Entering date:expr without ".." (for example date:yesterday) will not
work as you might expect. You can achieve the expected result by
duplicating the expr both sides of ".." (for example
date:yesterday..yesterday).
Open-ended ranges won't work with pre-1.2.1 Xapian, but they don't
produce an error either.
Signed-off-by: Jani Nikula <jani@nikula.org>
OpenBSD's build flags are identical to FreeBSD, except that libraries
need to be explicitly linked against libc. No code changes are
necessary.
From: Cody Cutler <ccutler@csail.mit.edu>
Fix the COERCE_STATUS macro to handle _internal_error being declared
as void function.
Note that the function _internal_error does not return. Evaluating to
NOTMUCH_STATUS_SUCCESS is done purely to appease the compiler.
Signed-off-by: Justus Winter <4winter@informatik.uni-hamburg.de>
The API documentation (notmuch.h) states that the parameter may be NULL,
but the implementation only checked the current element, potentially
dereferencing a NULL pointer in the process.
Signed-off-by: Sascha Silbe <sascha-pgp@silbe.org>
Previously, notmuch new only synchronized maildir flags to tags for
files with a maildir "info" part. Since messages in new/ don't have
an info part, notmuch would ignore them for flag-to-tag
synchronization.
This patch makes notmuch consider messages in new/ to be legitimate
maildir messages that simply have no maildir flags set. The most
visible effect of this is that such messages now automatically get the
unread tag.
Previously, we synchronized flags to tags for any message that looked
like it had maildir flags in its file name, regardless of whether it
was in a maildir-like directory structure. This was asymmetric with
tag-to-flag synchronization, which only applied to messages in
directories named new/ and cur/ (introduced by 95dd5fe5).
This change makes our interpretation stricter and addresses this
asymmetry by only synchronizing flags to tags for messages in
directories named new/ or cur/. It also prepares us to treat messages
in new/ as maildir messages, even though they lack maildir flags.
This way notmuch_message_maildir_flags_to_tags can call it. It makes
more sense for this to be just above all of the maildir
synchronization code rather than mixed in the middle.
Previously, if passed a filename with a directory that did not exist
in the database, _notmuch_message_remove_filename would needlessly
create that directory document. Fix it so that doesn't happen.
Previously, _notmuch_database_filename_to_direntry would abort with an
internal error when called on a read-only database. Now that creating
the directory document is optional,
notmuch_database_find_message_by_filename can disable directory
document creation (as it should) and, as a result, not abort on
read-only databases.
Using the new support from _notmuch_directory_create, this makes
notmuch_database_get_directory a read-only operation that simply
returns the directory object if it exists or NULL otherwise. This
also means that notmuch_database_get_directory can work on read-only
databases.
This change breaks the directory mtime workaround in notmuch-new.c by
fixing the exact issue it was working around. This permits mtime
update races to prevent scans of changed directories, which
non-deterministically breaks a few tests. The next patch fixes this.
Now _notmuch_database_filename_to_direntry takes a flags argument and
can indicate if the necessary directory documents do not exist.
Again, callers have been updated, but retain their original behavior.
Now _notmuch_database_find_directory_id takes a flags argument, which
it passes through to _notmuch_directory_create and can indicate if the
directory does not exist. Again, callers have been updated, but
retain their original behavior.
Previously this function would create directory documents if they
didn't exist. As a result, it could only be used on writable
databases. This adds an argument to make creation optional and to
make this function work on read-only databases. We use a flag
argument to avoid a bare boolean and to permit future expansion.
Both callers have been updated, but currently retain the old behavior.
We'll take advantage of the new argument in the following patches.
Previously, notmuch_database_get_directory had no way to indicate how
it had failed. This changes its prototype to return a status code and
set an out-argument to the retrieved directory, like similar functions
in the library API. This does *not* change its currently broken
behavior of creating directory objects when they don't exist, but it
does document it and paves the way for fixing this. Also, it can now
check for a read-only database and return
NOTMUCH_STATUS_READ_ONLY_DATABASE instead of crashing.
In the interest of atomicity, this also updates calls from the CLI so
that notmuch still compiles.
We've changed the APIs of notmuch_database_open,
notmuch_database_create, and notmuch_database_close.
Amended by db: also bump string in bindings/python/notmuch/globals.py
This is the notmuch_database_create equivalent of the previous change.
In this case, there were places where errors were not being propagated
correctly in notmuch_database_create or in calls to it. These have
been fixed, using the new status value.
It has been a long-standing issue that notmuch_database_open doesn't
return any indication of why it failed. This patch changes its
prototype to return a notmuch_status_t and set an out-argument to the
database itself, like other functions that return both a status and an
object.
In the interest of atomicity, this also updates every use in the CLI
so that notmuch still compiles. Since this patch does not update the
bindings, the Python bindings test fails.
Formerly notmuch_database_close closed the xapian database and
destroyed the talloc structure associated with the notmuch database
object. Split notmuch_database_close into notmuch_database_close and
notmuch_database_destroy.
This makes it possible for long running programs to close the xapian
database and thus release the lock associated with it without
destroying the data structures obtained from it.
This also makes the api more consistent since every other data
structure has a destructor function.
The comments in notmuch.h are a courtesy of Austin Clements.
Signed-off-by: Justus Winter <4winter@informatik.uni-hamburg.de>
Implicit typecast from 'void *' to 'T *' is okay in C, but not in
C++. In talloc_steal, an explicit cast is provided for type safety in
some GCC versions. Otherwise, a cast is required. Provide a template
function for this to maintain type safety, and redefine talloc_steal
to use it.
The template must be outside the extern "C" block (NOTMUCH_BEGIN_DECLS
and NOTMUCH_END_DECLS), but keep it within the GCC visibility #pragma.
No functional changes, apart from making the library build with
compilers other than recent GCC.
Signed-off-by: Jani Nikula <jani@nikula.org>
When the exclude tags contain a tag that does not occur anywhere in
the Xapian database the exclusion fails. We modify the way the query
is constructed to `work around' this. (In fact the new code is cleaner
anyway.)
It also seems to fix another exclusion failure bug reported by
jrollins but we have not yet worked out why it helps in that case.
Allow query debugging to be enabled at run-time by setting the
NOTMUCH_DEBUG_QUERY environment variable to a non-empty string.
Previously, enabling query debugging required recompiling, but parsed
queries are often useful for tracking down bugs in situations where
recompiling is inconvenient.
Formerly it was possible for *message_ret to be left
uninitialized. The documentation however clearly states that "[o]n any
failure or when the message is not found, this function initializes
'*message' to NULL".
Signed-off-by: Justus Winter <4winter@informatik.uni-hamburg.de>
Formerly the xapian database object was deleted and closed in its
destructor once the object was garbage collected. Explicitly call
close() so that the database and the associated lock is released
immediately.
The comment is a courtesy of Austin Clements.
Signed-off-by: Justus Winter <4winter@informatik.uni-hamburg.de>
Add the NOTMUCH_MESSAGE_FLAG_EXCLUDED flag to
notmuch_query_search_threads. Implemented by inspecting the tags
directly in _notmuch_thread_create/_thread_add_message rather than as
a Xapian query for speed reasons.
Note notmuch_thread_get_matched_messages now returns the number of
non-excluded matching messages. This API is not totally desirable but
fixing it means breaking binary compatibility so we delay that.
Add a flag NOTMUCH_MESSAGE_FLAG_EXCLUDED which is set by
notmuch_query_search_messages for excluded messages. Also add an
option omit_excluded_messages to the search that we do not want the
excludes at all.
This exclude flag will be added to notmuch_query_search threads in the
next patch.
This fixes a bug that didn't allow to search for non-ASCII words such
parts. The code here was copied from show_text_part_content(), because
the show command already does the needed conversion when showing the
message.
Previously opening a notmuch database in read write mode that has been
locked resulted in the notmuch_database_open function executing
notmuch_database_close as a cleanup function. notmuch_database_close
failed to check whether the xapian database has in fact been created.
Add a check whether the xapian database object has actually been
created before trying to call its flush method.
Signed-off-by: Justus Winter <4winter@informatik.uni-hamburg.de>
Previously, we manually "free"d various pointers in
notmuch_database_open. Use a local talloc context instead to simplify
cleanup and eliminate various NULL pointer initializations and
conditionals.
In the error-handling paths of notmuch_database_open, we call
notmuch_database_close, which "delete"s several objects referenced by
the notmuch_database_t object. However, some of these pointers may be
uninitialized, resulting in undefined behavior. Hence, allocate the
notmuch_database_t with talloc_zero to make sure these pointers are
NULL so that "delete"ing them is harmless.
This is useful for tags like "deleted" and "spam" that people
generally want to exclude from query results. These exclusions will
be overridden if a tag is explicitly mentioned in a query.
lib/messages.c: In function ‘notmuch_messages_move_to_next’:
lib/messages.c:131:2: warning: ISO C forbids ‘return’ with expression, in function returning void [-pedantic]
Signed-off-by: Jani Nikula <jani@nikula.org>
As reported in
id:"CAEbOPGyuHnz4BPtDutnTPUHcP3eYcRCRkXhYoJR43RUMw671+g@mail.gmail.com"
sometimes gmime tries to access a NULL pointer, e.g. g_mime_iconv_open()
tries to access iconv_cache that is NULL if g_mime_init() is not called.
This causes notmuch to segfault when calling gmime functions.
Calling g_mime_init() initializes iconv_cache and others variables needed
by gmime, making sure they are initialized when notmuch calls gmime
functions.
Test marked fix by db.
It appears to be an oversight that encrypted parts were indexed
previously. The terms generated from encrypted parts are meaningless
and do nothing but add bloat to the database. It is not worth
indexing the encrypted content, just as it's not worth indexing the
signatures in signed parts.
Commit 567bcbc2 introduced two new values for each message (content of the
"From" and "Subject" headers), but the comments about the database schema had
not been updated accordingly.
For some reason, on my machine, the link is picking up
/usr/lib/libutil.so instead of util/libutil.a. This causes there to be
undefined symbols in libnotmuch, making it unuseable. This patch causes
the link to fail instead.
Add function notmuch_query_count_threads() to get the number of threads
matching a search. This is done by performing a search and figuring out the
number of unique thread IDs in the matching messages, a significantly
heavier operation than notmuch_query_count_messages().
Signed-off-by: Jani Nikula <jani@nikula.org>
This is a rebase and cleanup of Istvan Marko's patch from
id:m3pqnj2j7a.fsf@zsu.kismala.com
Search retrieves these headers for every message in the search
results. Previously, this required opening and parsing every message
file. Storing them directly in the database significantly reduces IO
and computation, speeding up search by between 50% and 10X.
Taking full advantage of this requires a database rebuild, but it will
fall back to the old behavior for messages that do not have headers
stored in the database.
Apparently the method was renamed in Xapian 1.1.0 but the old method
name will stay around for a while. It seems better to stick with the
old name to make notmuch compile with older versions of Xapian, at
least for now.
We keep the lib/xutil.c version. As a consequence, also factor out
_internal_error and associated macros. It might be overkill to make a
new file error_util.c for this, but _internal_error does not really
belong in database.cc.
Based on discussions with amdragon, tschwinge, and others on IRC, I concluded that
1) symbol versioning was probably overkill for libnotmuch
2) It was also probably GNU ld specific
3) Most importantly, nobody could tell me on short notice how exactly it works.
So since the change to the notmuch_database_find_message breaks the
previous ABI, we need to bump the SONAME.
Previously, the functions notmuch_database_find_message() and
notmuch_database_find_message_by_filename() functions did not properly
report error condition to the library user.
For more information, read the thread on the notmuch mailing list
starting with my mail "id:871uv2unfd.fsf@gmail.com"
Make these functions accept a pointer to 'notmuch_message_t' as argument
and return notmuch_status_t which may be used to check for any error
condition.
restore: Modify for the new notmuch_database_find_message()
new: Modify for the new notmuch_database_find_message_by_filename()
State up front that these functions may add a filename to an existing
message or remove only a filename (and not the message), respectively.
Previously, this key information was buried in return value
documentation or in "notes", which made it seem secondary to these
functions' semantics.
Adding a message may involve changes to multiple database documents,
and thus needs to be done in a transaction. This makes add_message
(and, I think, the whole library) atomicity-safe: library callers only
needs to use atomic sections if they needs atomicity across multiple
library calls.
notmuch_database_find_message_by_filename is mostly stolen from
notmuch_database_remove_message, so this patch also vastly simplfies
the latter using the former.
This API is also useful in its own right and will be used in a later
patch for eager maildir flag synchronization.
Previously, notmuch_database_remove_message would remove the message
file name, sync the change to the message document, re-find the
message document, and then delete it if there were no more file names.
An interruption after sync'ing would result in a file-name-less,
permanently un-removable zombie message that would produce errors and
odd results in searches. We could wrap this in an atomic section, but
it's much simpler to eliminate the round-about approach and just
delete the message document instead of sync'ing it if we removed the
last filename.
notmuch_database_t now keeps a nesting count and we only start a
transaction or commit for the outermost atomic section.
Introduces a new error, NOTMUCH_STATUS_UNBALANCED_ATOMIC.
Previously, this function would synchronize the folder list even if
removing the file name failed. Now it returns immediately if removing
the file name fails.
If the configure script detects missing getline and/or getdelim
symbols, then notmuch will use it's own versions. This patch, based on
id:"87k49v12i5.fsf@pc44es141.cs.uni-magdeburg.de" by Matthias
Guedemann, adds the symbols to notmuch.sym as well so they are
properly exported from the library.
OpenBSD nm apparently doesn't support --defined.
The awk condition is based on the assumption that all defined symbols
have some hex number in the first column.
Thanks to Matthias Guedemann reporting the problem, and an earlier
version of this patch.
Unfortunately Robin Green's patch 52e4dedf9a was lost when I created
gen-version-script.sh. This merges his changes manually into that
script. It turns out tabs seem not needed in version script
files, so I simplified a bit and removed the printf.
Thanks to Alexander Botero-Lowry for help and testing.
If the notmuch.sym target does not explicitly depend on $(libnotmuch_modules),
gen-version-script.sh may be run before all the .o files are created, for
example when doing a parallel build on a machine with many cores.
Conflicts:
lib/Makefile.local
The conflicts are from three kinds of commits not merged into release:
- typo fixes
- removal of debug output
- fix for CLEAN rule
That were never merged into the release branch.
The lack of such exporting seems to cause problems catching
exceptions, as suggested by
http://gcc.gnu.org/wiki/Visibility
This manifested in the symbol-hiding test failing when notmuch was
compile with gcc 4.4.5. On i386, this further manifested as notmuch
new failing to run (crashing with an uncaught exception on first run).
Add removal of all ZXFOLDER terms to removal of all XFOLDER terms for
each message filename removal.
The existing filename-list reindexing will put all the needed terms
back in. Test search-folder-coherence now passes.
Signed-off-by:Mark Anderson <ma.skies@gmail.com>
(cherry picked from commit 8a856e5c38)
Add removal of all ZXFOLDER terms to removal of all XFOLDER terms for
each message filename removal.
The existing filename-list reindexing will put all the needed terms
back in. Test search-folder-coherence now passes.
Signed-off-by:Mark Anderson <ma.skies@gmail.com>
Carl reports "gcc -aux-info notmuch.aux lib/notmuch.h" does not
generate notmuch.aux for him with Debian gcc 4.6.0-8. A small
modification of the original sed regular expression allows us to work
directly from lib/notmuch.h, rather than preprocessing with gcc.
As with most such simple regex based "parsing", this is quite
sensitive to the input format, and needs that each symbol to be
exported from libnotmuch should
- start with "notmuch_"
- be the first non-whitespace token on the line
- be followed by an open parenthesis.
(Cherry-picked from 51b7ab6968, with conflicts resolved by db)
Carl reports "gcc -aux-info notmuch.aux lib/notmuch.h" does not
generate notmuch.aux for him with Debian gcc 4.6.0-8. A small
modification of the original sed regular expression allows us to work
directly from lib/notmuch.h, rather than preprocessing with gcc.
As with most such simple regex based "parsing", this is quite
sensitive to the input format, and needs that each symbol to be
exported from libnotmuch should
- start with "notmuch_"
- be the first non-whitespace token on the line
- be followed by an open parenthesis.
- c0961e6 introduced a missing slash between $(dir)$(LIBNAME) and missing
$(dir) in front of libnotmuch.a
- cdf1c70a created a file $(dir)/notmuch.h.gch and neglected to
add it to CLEAN
Various typo fixes in comments within the source code.
Signed-off-by: Pieter Praet <pieter@praet.org>
Edited-by: Carl Worth <cworth@cworth.org> Restricted to just
source-code comments, (and fixed fix of "descriptios" to "descriptors"
rather than "descriptions").
Various typo fixes in comments within the Makefile and other build scripts.
Signed-off-by: Pieter Praet <pieter@praet.org>
Edited-by: Carl Worth <cworth@cworth.org> Restricted to just build files.
This is closely tied to gcc and particularly gnu ld, but I guess the
shared library linking code would need to be adjusted to work on a
non-gnu linker anyay.
I had to make a few not-obviously related changes to the
lib/Makefile.local to make this work: libnotmuch_modules is defined
with := and used in place of $^
(cherry picked from commit 014bf85b1c06ff49be2bde5a26433d2cf376cf70)
We're not properly concatenating the Received headers if we parse them
while requesting a header that isn't Received.
this fixes notmuch-reply address detection in a bunch of situations.
This patch adds the tag "signed" to messages with any multipart/signed
parts, and the tag "encrypted" to messages with any
multipart/encrypted parts. This only occurs when messages are indexed
during notmuch new, so a database rebuild is required to have old
messages tagged.
As of gcc 4.6, there are new warnings from -Wattributes along the lines of:
warning: ‘_notmuch_messages’ declared with greater visibility
than the type of its field ‘_notmuch_messages::iterator’
[-Wattributes]
To squelch these, we decorate all such containing structs with
__attribute__((visibility("default"))). We take care to let only the
C++ compiler see this, (since the C compiler would otherwise warn
about ignored visibility attributes on types).
gcc (at least as of version 4.6.0) is kind enough to point these out to us,
(when given -Wunused-but-set-variable explicitly or implicitly via -Wunused
or -Wall).
One of these cases was a legitimately unused variable. Two were simply
variables (named ignored) we were assigning only to squelch a warning about
unused function return values. I don't seem to be getting those warnings
even without setting the ignored variable. And the gcc docs. say that the
correct way to squelch that warning is with a cast to (void) anyway.
Now each caller of notmuch_message_get_tags only gets a new iterator,
instead of a whole new list. In principle this could cause problems
with iterating while modifying tags, but through the magic of talloc
references, we keep the old tag list alive even after the cache in the
message object is invalidated.
This reduces my index search from the 3.102 seconds before the unified
metadata pass to 1.811 seconds (1.7X faster). Combined with the
thread search optimization in b3caef1f06,
that makes this query 2.5X faster than when I started.
Even if the caller never uses the file names, there is little cost to
simply fetching the file name terms. However, retrieving the full
paths requires additional database work, so the expansion from terms
to full paths is performed lazily.
This also simplifies clearing the filename cache, since that's now
handled by the generic metadata cache code.
This further reduces my inbox search from 3.102 seconds before the
unified metadata pass to 2.206 seconds (1.4X faster).
Replace _notmuch_convert_tags with this and simplify
_create_filenames_for_terms_with_prefix. This will also come in handy
shortly to get the message file name list.
This replaces the guts of the filename list and tag list, making those
interfaces simple iterators over the generic string list. The
directory, message filename, and tags-related code now build generic
string lists and then wraps them in specific iterators. The real wins
come in later patches, when we use these for even more generic
functionality.
As a nice side-effect, this also eliminates the annoying dependency on
GList in the tag list.
This performs a single pass over a message's term list to fetch the
thread ID, message ID, and reply-to, rather than requiring a pass for
each. Xapian decompresses the term list anew for each iteration, so
this reduces the amount of time spent decompressing message metadata.
This reduces my inbox search from 3.102 seconds to 2.555 seconds (1.2X
faster).
Such as:
mkdir build
cd build
../configure
make
This is implemented by having the configure script set a srcdir
variable in Makefile.config, and then sprinkling $(srcdir) into
various make rules. We also use vpath directives to convince GNU make
to find the source files from the original source directory.
Don't require the caller of _notmuch_doc_id_set_init to pass in a
correct bound; instead compute it from the array. This simplifies the
caller and makes this interface easier to use correctly.
Remove the repeated "sizeof (doc_ids->bitmap[0])" that bothered cworth
by instead defining macros to compute the word and bit offset of a
given bit in the doc ID set bitmap.
With talloc, we were already freeing all memory by the time we exited
the loop, but that didn't help with excess use of memory inside the
loop, (which was mostly from tallocing some objects with the incorrect
parent).
Thanks to Andrew Tridgell for sitting next to me and teaching me to
use talloc_report_full to find these leaks.
A new "folder:" prefix in the query string can now be used to match
the directories in which mail files are stored.
The addition of this feature causes the recently added
search-by-folder tests to now pass.
Using the local talloc context ensures that the memory we are using
here will be freed shortly, (rather than hanging on for a long time
with the notmuch database object).
This reduces thread search's 1+2t Xapian queries (where t is the
number of matched threads) to 1+t queries and constructs exactly one
notmuch_message_t for each message instead of 2 to 3.
notmuch_query_search_threads eagerly fetches the docids of all
messages matching the user query instead of lazily constructing
message objects and fetching thread ID's from term lists.
_notmuch_thread_create takes a seed docid and the set of all matched
docids and uses a single Xapian query to expand this docid to its
containing thread, using the matched docid set to determine which
messages in the thread match the user query instead of using a second
Xapian query.
This reduces the amount of time required to load my inbox from 4.523
seconds to 3.025 seconds (1.5X faster).
We really want to change the thread subject at the same time we set
the date, (if the sort order indicates this is necessary). The
previous code for setting the thread subject was sensitive on the
query sort when adding matching messages. An independent bug fix is
about to change that query sort order, so we remove the dependency on
it here.
This was a misfeature where notmuch had extra code that just threw
away legitimate information. It was never indexing an initial "Re"
term in a subject. But some users have legitimately wanted to search
for this term.
The original code was written this way merely for strict compatiblity
with the indexing performed by sup, but we're not taking advantage of
that now anyway.
This is to prevent notmuch from destroying any information the user
has encoded as flags in the maildir filename. Tests are also added to
the test suite to verify the documented behavior.
Some people use notmuch with non-maildir files, (for example, email
messages in MH format, or else cool things like using sluk[*] to suck
down feeds into a format that notmuch can index).
To better support uses like that, don't do any renaming for files that
are not in a directory named either "new" or "cur".
[*] https://github.com/krl/sluk/
I had originally hoped for better semantics, such as doing nothing in
non-maildir directories, and preserving unknown maildir flags that
happen to be present.
We could still do those things, of course, but for now, remove them
from the documentation since the implementation does not do these
things yet.
It is totally legitimate for a non-maildir directory to be named "new"
(and not have a directory next to it named "cur"). To support this
case at least, be silent about any rename failure.
If a filename has no maildir info at all, (that is, it does not
contain the sequence ":2,"), we consider this distinct from a filename
with an empty maildir info, (the ":2," separator is present, but no
flags characters follow).
Specifically, we regard a missing info field as providing no
information, so tags will remain unchanged. On the other hand, an info
field that is present but has no flags set will cause various tags to
be cleared, (or in the case of "unread", added).
This fixes the "remove info" case of the maildir-sync tests in the
test suite.
Previously the documentation of notmuch_message_maildir_flags_to_tags
suggested that the presence of a flag would cause tags to be added,
(or in the case of "unread", removed). But the case of absent maildir
flags was not explicitly described.
What we actually want, is that for supported flags, the absence of the
flag in all messages causes the corresponding tag to be removed,
(or in the case of "unread", added). So document that explicitly.
This is the case recently added to the test suite as a failing test,
(so we'll need to do bug fixing before the documentation is honest
here).
We have tests to ensure that when the notmuch library renames a file
that that rename takes place immediately in the database, (without
requiring something like "notmuch new" to notice the change).
This was working when the code was first added, but recently broke in
the reworking of the maildir-synchronization interface since the
tags_to_maildir_flags function can no longer assume that it is being
called as part of _notmuch_message_sync.
Fortunately, the fix is as simple as adding an explicit call to
_notmuch_message_sync.
As documented, this function now iterates over all filenames for the
message, computing a logical OR of the flags set on the filenames,
then uses the final result to set tags on the message.
This change fixes 3 of the 10 maildir-sync tests that have been
failing since being added.
This augments the existing notmuch_message_get_filename by allowing
the caller access to all filenames in the case of multiple files for a
single message.
To support this, we split the iterator (notmuch_filenames_t) away from
the list storage (notmuch_filename_list_t) where previously these were
a single object (notmuch_filenames_t). Then, whenever the user asks
for a file or filename, the message object lazily creates a complete
notmuch_filename_list_t and then:
For notmuch_message_get_filename, returns the first filename
in the list.
For notmuch_message_get_filenames, creates and returns a new
iterator for the filename list.
The new implementation is simply a talloc-based list of strings. The
former support (a list of database terms with a common prefix) is
implemented by simply pre-iterating over the terms and populating the
list. This should provide no performance disadvantage as callers of
thigns like notmuch_directory_get_child_files are very likely to
always iterate over all filenames anyway.
This new implementation of notmuch_filenames_t is in preparation for
adding API to query all of the filenames for a single message.
This rather ugly hack was recently obviated by the removal of the
notmuch_database_set_maildir_sync function. Now, clients must make
explicit calls to do any syncrhonization between maildir flags and
tags. So the library no longer needs to worry about doing inconsistent
synchronization while a message is only partially added.
Instead of having an API for setting a library-wide flag for
synchronization (notmuch_database_set_maildir_sync) we instead
implement maildir synchronization with two new library functions:
notmuch_message_maildir_flags_to_tags
and notmuch_message_tags_to_maildir_flags
These functions are nicely documented here, (though the implementation
does not quite match the documentation yet---as plainly evidenced by
the current results of the test suite).
Tags in a notmuch database affect all messages with the identical
message-ID. But maildir tags affect individual files. And since
multiple files can contain the identical message-ID, there is not a
one-to-one correspondence between messages affected by tags and flags.
This is particularly dangerous with the 'T' (== "trashed") maildir
flag and the corresponding "deleted" tag in the notmuch
database. Since these flags/tags are often used to trigger
irreversible deletion operations, the lack of one-to-one
correspondence can be potentially dangerous.
For example, consider the following sequence:
1. A third-party application is used to identify duplicate messages
in the mail store, and mark all-but-one of each duplicate with
the 'T' flag for subsequent deletion.
2. A "notmuch new" operation reads that 'T' flag, adding the
"deleted" flag to the corresponding messages within the notmuch
database.
3. A subsequent notmuch operation, (such as a "notmuch dump; notmuch
restore" cycle) synchronized the "deleted" tag back to the mail
store, applying the 'T' flag to all(!) filenames with duplicate
message IDs.
4. A third-party application reads the 'T' flags and irreversibly
deletes all mail messages which had any duplicates(!).
In order to avoid this scenario, we simply refuse to synchronize the
'T' flag with the "deleted" tag. Instead, applications can set 'T' and
act on it to delete files, or can set "deleted" and act on it to
delete files. But in either case the semantics are clear and there is
never dangerous propagation through the one-to-many mapping of notmuch
message objects to files.
This adds group [maildir] and key 'synchronize_flags' to the
configuration file. Its value enables (true) or diables (false) the
synchronization between notmuch tags and maildir flags. By default,
the synchronization is disabled.
This patch allows bi-directional synchronization between maildir
flags and certain tags. The flag-to-tag mapping is defined by flag2tag
array.
The synchronization works this way:
1) Whenever notmuch new is executed, the following happens:
o New messages are tagged with configured new_tags.
o For new or renamed messages with maildir info present in the file
name, the tags defined in flag2tag are either added or removed
depending on the flags from the file name.
2) Whenever notmuch tag (or notmuch restore) is executed, a new set of
flags based on the tags is constructed for every message and a new
file name is prepared based on the old file name but with the new
flags. If the flags differs and the old message was in 'new'
directory then this is replaced with 'cur' in the new file name. If
the new and old file names differ, the file is renamed and notmuch
database is updated accordingly.
The rename happens before the database is updated. In case of crash
between rename and database update, the next run of notmuch new
brings the database in sync with the mail store again.
This prevents any of the private functions from being leaked out
through the library interface (at least when compiling with a
recent-enough gcc to support the visibility pragma).
These various functions and data are all used only locally, so should
be marked static. Ensuring we get these right will avoid us accidentally
leaking unintended symbols through the library interface.
This increment is for the recently-added functions:
notmuch_query_get_query_string
notmuch_query_get_sort
These were recently added to the library interface, but the library
version was not incremented at that time, (shame on me).
Hi,
If I want to build Debian package, it fails with the following message:
ldconfig: Can't create temporary cache file /etc/ld.so.cache~: Permission denied
make[1]: *** [install-lib] Error 1
The reason is that I build the package as a non-root user and make
install invokes ldconfig unconditionally. The following patch contains a
workaround, but I think that a more correct solution would be to check
the condition LIBDIR_IN_LDCONFIG directly when make install is invoked
rather than in configure as it is done now.
Signed-off-by: Michal Sojka <sojkam1@fel.cvut.cz>
Previously, if the underlying search_messages hit an exception and returned
NULL, this function would ignore that and return a non-NULL, (but empty)
threads object. Fix this to properly propagate the error.
Thanks to the new git-based test suite, it's easy to run the whole
test suite in valgrind, (simply "make test OPTIONS="--valgrind"), and
doing so showed this obvious use-after-free bug, (triggered by the
thread-order tests).
Various users were confused as to why they couldn't run notmuch
immediately after "make install", (with linker errors saying that
libnotmuch.so could not be found). The errors came from two different
causes:
1. The user had installed to a system library directory, but had not
yet run ldconfig.
2. The user had installed to some non-system directory, and had not
set the LD_LIBRARY_PATH variable.
With this change we fix both problems (on Linux) without the user
having to do anything additional. We first use ldconfig to find the
system library directories. If the user is installing to one of these,
then we run ldconfig as part of "make install".
For case (2) we use the -rpath and --enable-new-dtags linker options
to install a DT_RUNPATH entry in the binary. This entry tells the
dynamic linker where to find libnotmuch. Without the
--enable-new-dtags option only a DT_RPATH option would be installed,
(which has the drawback of not allowing any override with the
LD_LIBRARY_PATH variable).
Distributions (such as Debian and Fedora) don't want to see binaries
packaged with a DT_RPATH or DT_RUNPATH entry. This should be avoided
automatically as long as the packages install to standard locations,
(such as /usr/lib).
Scott Henson reported an internal error that occurred when he tried to
add a message that referenced another message with a message ID well
over 300 characters in length. The bug here was running into a Xapian
limit for the length of metadata key names, (which is even more
restrictive than the Xapian limit for the length of terms).
We fix this by noticing long message ID values and instead using a
message ID of the form "notmuch-sha1-<sha1_sum_of_message_id>". That
is, we use SHA1 to generate a compressed, (but still unique), version
of the message ID.
We add support to the test suite to exercise this fix. The tests add a
message referencing the long message ID, then add the message with the
long message ID, then finally add another message referencing the long
ID. Each of these tests exercise different code paths where the
special handling is implemented.
A final test ensures that all three messages are stitched together
into a single thread---guaranteeing that the three code paths all act
consistently.
Previously we were using Xapian's add_document to allocate document ID
values for notmuch_message_t objects. This had the drawback of adding
a partially constructed mail document to the database. If notmuch was
subsequently interrupted before fully populating this document, then
later runs would be quite confused when seeing the partial documents.
There are reports from the wild of people hitting internal errors of
the form "Message ... has no thread ID" for example, (which is
currently an unrecoverable error).
We fix this by manually allocating document IDs without adding
documents. With this change, we never call Xapian's add_document
method, but only replace_document with either the current document ID
of a message or a new one that we have allocated.
Admittedly, an author name ending in ',' guarantees this is spam, and
indeed this was triggered by a spam email, but that doesn't mean we
shouldn't handle this case correctly.
We now check that there is actually a component of the name (presumably
the first name) after the comma in the author name.
Signed-off-by: Dirk Hohndel <hohndel@infradead.org>
Just before releasing 0.3 we received reports of crashes that were
bisected to the commit adding thread-author moving. Sure enough,
valgrind pointed to buffer overruns in _thread_move_matched_author.
Rather than trying to make sense of all the by strncpy, strchr, +1,
and +2 of that code, I reimplemented thread-author ordering with a
pair of hash tables and an array.
Valgrind is at least happy now on the test cases it was complaining
about previously.
With this patch the Received: header becomes special in the way
we treat headers - this is the only header for which we concatenate
all the instances we find (instead of just returning the first one).
This will be used in the From guessing code for replies as we need to
be able to walk ALL of the Received: headers in a message to have a
good chance to guess which mailbox this email was delivered to.
Signed-off-by: Dirk Hohndel <hohndel@infradead.org>
This patch only addresses the typical Outlook/Exchange case
where we have "Last, First" <first.last@company.com> or
"Last, First MI" <first.mi.last@company.com>.
In the future we should be more fexible as to the formats
we recognize, but for now we address this one as it is the
Exchange default setting and therefore the most common one.
Signed-off-by: Dirk Hohndel <hohndel@infradead.org>
When displaying threads as result of a search it makes sense to list those
authors first who match the search. The matching authors are separated from the
non-matching ones with a '|' instead of a ','
Imagine the default "+inbox" query. Those mails in the thread that
match the query are actually "new" (whatever that means). And some
people seem to think that it would be much better to see those author
names first. For example, imagine a long and drawn out thread that once
was started by me; you have long read the older part of the thread and
removed the inbox tag. Whenever a new email comes in on this thread,
prior to this patch the author column in the search display will first show
"Dirk Hohndel" - I think it should first show the actual author(s) of the new
mail(s).
Signed-off-by: Dirk Hohndel <hohndel@infradead.org>
message->authors contains the author's name (as we want to print it)
get / set methods are declared in notmuch-private.h
Signed-off-by: Dirk Hohndel <hohndel@infradead.org>
Our current approach is for top-level entry poitns in the library
to have try/catch blocks that catch any Xapian exception and print
a message. Add a few missing blocks and fix up the documentation.
Sebastian Spaeth reported [*] a segfault within libnotmuch when
running notmuch operations while an asyncronous offlineimap job had
removed some files from the mail store. Avoid this by handling all
cases where notmuch_message_get_header could return NULL.
[*] See message id:87d3xqti3o.fsf@SSpaeth.de on notmuch@notmuchmail.org
Previously, we always sorted the returned results by some string value,
(newest-to-oldest by default), however in some cases (as when applying
tags to a search result) we are not interested in any special order.
This introduces a NOTMUCH_SORT_UNSORTED value that does just that. It is
not used at the moment anywhere in the code.
Signed-off-by: Sebastian Spaeth <Sebastian@SSpaeth.de>
The thread-naming feature depends on the matched messages being passed
down in a precise order, (the order of the top-level search). We fix
the feature by passing that sort order down.
We know that matched messages are always added in order, so we can
always just grab the subject from the first message. This is the same
approach that was used previously in _thread_add_message. That is, the
recent feature of renaming a thread based on the subject of the
"first" matched message is as simple as moving the subject assignment
from _thread_add_message to _thread_add_matched_message.
At the moment all threads are named based on the name of the first message
in the thread. However, this can cause problems if people either start
new threads by replying-all (as unfortunately, many out there do) or
change the subject of their mails to reflect a shift in a thread on a
list.
This patch names threads based on (a) matches for the query, and (b) the
search order. If the search order is oldest-first (as in the default
inbox) it chooses the oldest matching message as the subject. If the
search order is newest-first it chooses the newest one.
Reply prefixes ("Re: ", "Aw: ", "Sv: ", "Vs: ") are ignored
(case-insensitively) so a Re: won't change the subject.
Note that this adds a "sort" argument to _notmuch_thread_create and
_thread_add_matched_message, so that when constructing the thread we can
be aware of the sort order.
Signed-off-by: Jesse Rosenthal <jrosenthal@jhu.edu>
When constructing a thread, we usually run a nested query to find all
messages in the thread that match the original search string. However,
we need to have special-case handling of an original search string of
"*" now that that is a supported means of specifying all messages.
The special-case ends up bein quite simple---we do less work, (just
skipping the nested search since we know that all messages must
match). I had been wanting to write this identical code to more
efficiently handle "notmuch search thread:<foo>" which was previously
running two identical searches. So that case is now more efficient as
well.
This encodes the library version into the library, where the linking
binary can pick it up, and the linker can even enforce mismatches in
the minor release, (such as linking a binary against version 1.2 and
then attempting to run it against version 1.1).
I'm not sure which system Aaron used, but on the machine I have access
to, (Darwin 8.11.0), the -shared and -dylib_install_name options are
not recognized. Instead I use -dynamic_lib and -install_name as
documented here:
http://www.finkproject.org/doc/porting/shared.php
This patch adds a configure check for OS X (actually Darwin),
and sets up the Makefiles to build a proper shared library on
that platform.
Signed-off-by: Aaron Ecay <aaronecay@gmail.com>
notmuch previously unconditionally checked mime parts for various
properties, but not for NULL, which is the case if libgmime encounters
an empty mime part.
Upon encounter of an empty mime part, the following is printed to
stderr (the second line due to my patch):
(process:17197): gmime-CRITICAL **: g_mime_message_get_mime_part: assertion `GMIME_IS_MESSAGE (message)' failed
Warning: Not indexing empty mime part.
This is probably a bug that should get addressed in libgmime, but for
not, my patch is an acceptable workaround.
Signed-off-by: martin f. krafft <madduck@madduck.net>
Reviewed-by: Carl Worth <cworth@cworth.org>:
The original proposal for having different open modes used the name
WRITABLE. I didn't like that name, (easy to misspell as WRITEABLE even
for native English speakers). So we renamed it to READ_WRITE
immediately, but apparently some of the documentation held the old
name for a while.
Previously, we were only adding the reference terms for cases where
the referenced message did not yet exist in the database. For thread
presentation, it's useful to have the connection information provided
by the references, even when the messages are present. So add this
term unconditionally.
This function was recently modified, (to include a metadata lookup for
a message's thread ID before looking for parent/child thread IDs), but
the documentation wasn't updated. Fix that.
There are two primary cases in this function, (the message exists in
the database or it does not). Previously the code for these two cases
was split and intermingled with goto-spaghetti connections.
This allows us to thread messages even when we receive them out of
order, or never receive the root.
The thread ids for messages that aren't present but are referred to are
stored as metadata in the database and then retrieved if we ever get
that message.
When determining the thread id for a message we also check for this
metadata so that we can thread descendants of a message together before
we receive it.
Edited by Carl Worth <cworth@cworth.org>: Split this portion of the
commit from the earlier-applied portion adding test cases.
This seems like a generally useful thing to support, (but the previous
support through an empty string was not convenient for some users,
(such as the command-line client).
fix notmuch_message_file_get_header to always return the first instance
of the header you are looking for
Signed-off-by: Dirk Hohndel <hohndel@infradead.org>
With the original quiet function, there's an actual purpose (hiding
excessively long compiler command lines so that warnings and errors
from the compiler can be seen).
But with things like quiet_symlink there's nothing quieter. In fact
"SYMLINK" is longer than "ln -sf". So all this is doing is hiding the
actual command from the user for no real benefit.
The only actual reason we implemented the quiet_* functions was to be
able to neatly right-align the command name and left-align the arguments.
Let's give up on that, and just left-align everything, simplifying the
Makefiles considerably. Now, the only instances of a captialized command
name in the output is if there's some actually shortening of the command
itself.
We add a magic line to the beginning of each Makefile.local file to
help the editor know that it should use makefile mode for editing the
file, (even though the filename isn't exactly "Makefile").
Edited-by: Carl Worth <cworth@cworth.org>: Expand treatment from
emacs/Makefile.local to each instance of Makefile.local.
The idea here is to allow a new user of notmuch to be able to run
notmuch immediately after compiling, (without having to install
the shared library first). This also ensures that the test suite
tests the locally compiled library, and not whatever installled
version of the library the dynamic linker happens to find.
When I wanted to create a debian package from the current master, make
install failed because of non-existent include directory. This patch
fixes this minor issue.
We had a fairly ugly violation of modularity with the top-level
Makefile.local isntalling everything, (even when the build commands
for the library were down in lib/Makefile.local).
For the case of adding a file that already exist, (with the same
filename). In this case, nothing will happen to the database, but
that wasn't clear before.
We were previously maintaining two lists of the child Makefile
fragments---one for the includes and another for the dependencies. So,
of course, they drifted and the dependency list wasn't up to date.
We fix this by adding a single subdirs variable, and then using GNU
Makefile substitution to generate both the include and the dependency
lists.
Some side effect of this change caused the '=' assignment of the dir
variable to not work anymore. I'm not sure why that is, but using ':='
makes sense here and fixes the problem.
Commit cd467caf renamed notmuch_query_search to notmuch_query_search_messages.
Commit 1ba3d46f created notmuch_query_search_threads. We better keep the docs
of notmuch_query_create consistent with those changes.
Signed-off-by: Fernando Carrijo <fcarrijo@yahoo.com.br>
Edited-by: Carl Worth to explicitly list the full name of each
function being referenced.
We rename 'has_more' to 'valid' so that it can function whether
iterating in a forward or reverse direction. We also rename
'advance' to 'move_to_next' to setup parallel naming with
the proposed functions 'move_to_first', 'move_to_last', and
'move_to_previous'.
Thanks to Michal Sojka <sojkam1@fel.cvut.cz> for pointing out the
correct fix, which I verified in the freely-available WG14/N1124 draft
(from the C99 working group) which is available here:
http://www.open-std.org/JTC1/SC22/wg14/www/docs/n1124.pdf
The sequential identifiers have the advantage of being guaranteed to
be unique (until we overflow a 64-bit unsigned integer), and also take
up half as much space in the "notmuch search" output (16 columns
rather than 32).
This change also has the side effect of fixing a bug where notmuch
could block on /dev/random at startup (waiting for some entropy to
appear). This bug was hit hard by the test suite, (which could easily
exhaust the available entropy on common systems---resulting in large
delays of the test suite).
If we had external users of this filter then they might expect some of
these macros to exist. But since this is just internal, that's just
unneeded noise.
With modern MIME attachments, we're already avoiding indexing the
attachments. But for old-school uuencoded data in the mail, we have
been directly indexing the encoded data as terms, (which is not useful
at all---nobody will ever ytry to search based on the seemingly random
uuencoded data).
Additionally, indexing a modestly large uuencoded file seems to make
Xapian go insane, (consuming *lots* of memory).
We fix both problems by detecting uuencoded content and not performing
any indexing of it.
Previously we were printing a number of messages upgraded so far. The
original motivation for this was to accurately reflect the fact that
there are two passes, (so each message is processed twice and it's not
accurate to represent with a single count). But as it turns out, the
second pass takes zero time (relatively speaking) so we're still not
accounting for it.
If nothing else, the percentage-based reporting makes for a cleaner
API for the progress_notify function.
The WDF is the "within-document frequency" value for a particular
term. It's intended to provide an indication of how frequent a term is
within a document, (for use in computing relevance). Xapian's term
generator already computes WDF values when we use that, (which we do
for indexing all mail content).
We don't use the term generator when adding single terms for things
that don't actually appear in the mail document, (such as tags, the
filename, etc.). In this case, the WDF value for these terms doesn't
matter much.
But Xapian's flint backend can be more efficient with changes to terms
that don't affect the document "length". So there's a performance
advantage for manipulating tags (with the flint backend) if the WDF of
these terms is 0.
All notmuch searches currently sort by value (either date or message
ID) so it's just wasted effort for Xapian to compute relevance values
for each result. We now explicitly tell Xapian that we're uninterested
in the relevance values.
The first phase copies data from the old format to the new format
without deleting anything. This allows an old notmuch to still use the
database if the upgrade process gets interrupted. The second phase
performs the deletion (after updating the database version number). If
the second phase is interrupted, there will be some unused data in the
database, but it shouldn't cause any actual harm.
The recent support for renames in the database is our first time
(since notmuch has had more than a single user) that we have a
database format change. To support smooth upgrades we now encode a
database format version number in the Xapian metadata.
Going forward notmuch will emit a warning if used to read from a
database with a newer version than it natively supports, and will
refuse to write to a database with a newer version.
The library also provides functions to query the database format
version:
notmuch_database_get_version
to ask if notmuch wants a newer version than that:
notmuch_database_needs_upgrade
and a function to actually perform that upgrade:
notmuch_database_upgrade
Previously we had NOTMUCH_DATABASE_MODE_READ_ONLY but
NOTMUCH_STATUS_READONLY_DATABASE which was ugly and confusing. Rename
the latter to NOTMUCH_STATUS_READ_ONLY_DATABASE for consistency.
Previously, many checks were deep in the library just before a cast
operation. These have now been replaced with internal errors and new
checks have instead been added at the beginning of all top-levelentry
points requiring a read-write database.
The new checks now also use a single function for checking and
printing the error message. This will give us a convenient location to
extend the check, (such as based on database version as well).
The original wording made it sound like this function was just doing
some string manipulation. But this function actually creates new
directory documents as a side effect. So make that explicit in its
documentation.
When a notmuch database is upgraded to the new database format, (to
support file rename and deletion), any message documents corresponding
to deleted files will not currently be upgraded. This means that a
search matching these documents will find no filenames in the expected
place.
Go ahead and return the filename as originally stored, (rather than
aborting with an internal error), in this case.
Similar to the return value of notmuch_database_add_message, we now
enhance the return value of notmuch_database_remove_message to
indicate whether the message document was entirely removed (SUCCESS)
or whether only this filename was removed and the document exists
under other filenamed (DUPLICATE_MESSAGE_ID).
Previously, adding a filename with the same message ID as an existing
message would do nothing. But we recently fixed this to instead add
the new filename to the existing message document. So update the
documentation to match now.
In the presentation we often omit citations and signatures, but this
is not content that should be omitted from the index, (especially
when the citation detection is wrong---see cases where a line
beginning with "From" is corrupted to ">From" by mail processing
tools).
This new directory ojbect provides all the infrastructure needed to
detect when files or directories are deleted or renamed. There's still
code needed on top of this (within "notmuch new") to actually do that
detection.
This commit contains my changes to the API proposed by Keith. Nothing
is dramatically different. There are minor things like changing
notmuch_files_t to notmuch_filenames_t and then various things needed
for completeness as noticed while implementing this, (such as
notmuch_directory_destroy and notmuch_directory_set_mtime).
This will allow applications to support the removal of messages, (such
as when a file is deleted from the mail store). No removal support is
provided yet in commands such as "notmuch new".
The existing find_doc_ids function is convenient when the caller
doesn't want to be bothered constructing a term. But when the caller
*does* have the term already, that interface is just wasteful. So we
export a lower-level interface that maps a pre-constructed term to a
document-ID iterators.
The code to map a filename to a direntry is something that we're going
to want in a future _remove_message function, so put it in a new
function _notmuch_database_filename_to_direntry .
The library interface is unchanged so far, (still just
notmuch_database_add_message), but internally, the old
_set_filename function is now _add_filename instead.
Instead of storing the complete message filename in the data portion
of a mail document we now store a 'direntry' term that contains the
document ID of a directory document and also the basename of the
message filename within that directory. This will allow us to easily
store multple filenames for a single message, and will also allow us
to find mail documents for files that previously existed in a
directory but that have since been deleted.
Some pending commits want the _split_path functionality separate from
mapping a directory to a document ID. The split_path function now
returns the basename as well as the directory name.
We're planning to have mail documents refer to directory documents for
the path of the containing directory. To support this, we need the
path in the data, (since the path in the 'directory' term can be
irretrievable as it will be the SHA1 sum of the path for a very long
path).
We'll soon have mail documents referring to their parent directory's
directory documents, so we'll need access to _find_parent_id in files
such as message.cc.
Storing the document ID of the parent of each directory document will
allow us to find all child-directory documents for a given directory
document. We will need this in order to detect directories that have
been removed from the mail store, (though we aren't yet doing this).
The recent change from storing absolute paths to relative paths means
that new directory documents will already be created, (and the old
ones will just linger stale in the database). Given that, we might as
well put a clean name on the term in the new documents, (and no real
flag day is needed).
We were already storing relative mail filenames, so this is consistent
with that. Additionally, it means that directory documents remain
valid even if the database is relocated within its containing
filesystem.
We'll soon be having multiple entry points that accept a filename
path, so we want common code for getting a relative path from a
potentially absolute path.
And fix the initialization such that the private enum will always have
distinct values from the public enum even if we similarly miss the
addition of a new public value in the future.
The function _notmuch_message_add_thread_id has been removed
from the private interface of notmuch. There's no reason for
one to keep a declaration of its prototype in the code base.
Also, lets update a commentary that referenced that function
and escaped from previous scrutiny.
Signed-off-by: Fernando Carrijo <fcarrijo@yahoo.com.br>
Since we need to do this for portability, (some systems don't have a
strndup function), we might as well do it unconditionally. There's
almost no disadvantage to doing so, and this has the advantages of not
requiring a configure-time check nor having two different
implementations, one of which would often be less tested.
We carefully noted the fact that we had locally allocated the string
here, but then we neglected to free it. Switch to talloc instead
which makes it easier to get the behavior we want. It's simpler since
we can just call talloc_free unconditionally, without having to track
the state of whether we allocated the storage for name or not.
This error was tirggered with a debugging build via:
make CXXFLAGS="-DDEBUG"
and reported by David Bremner. The actual error is that I'm an
idiot that doesn't know how to use strcmp's return value. Of
course, the strcmp interface scores a negative 7 on Rusty Russell
ranking of bad interfaces:
http://ozlabs.org/~rusty/index.cgi/tech/2008-04-01.html
As per Carl's request, this patch corrects the only value defined under
the notmuch_message_flag_t enum typedef to match the name of the type.
Signed-off-by: Bart Trojanowski <bart@jukie.net>
If Xapian threw an exception on notmuch_query_count_messages the count
variable could be used uninitialized. Initialize count to solve the
problem.
Signed-off-by: Jeffrey C. Ollie <jeff@ocjtech.us>
When _notmuch_thread_create() is given a query string, it can return more
messages than just those matching the query. To distinguish those that
matched the query expression, the MATCHING_SEARCH flag is set
appropriately.
Signed-off-by: Bart Trojanowski <bart@jukie.net>
This patch allows for different flags, internal to notmuch, to be set on a
message object. The patch does not define any such flags, just the
facilities to manage these flags.
Signed-off-by: Bart Trojanowski <bart@jukie.net>
This patch adds a new function that can be used to collect a list of
unique tags from a list of messages. 'notmuch search-tags' uses the
function to get a list of tags from messages matching a search-term,
but it has the potential to be used elsewhere so we put it in the lib.
Signed-off-by: Jan Janak <jan@ryngle.com>
This patch adds a new function called notmuch_database_get_all_tags
which can be used to obtain a list of all tags from the database
(in other words, the list contains all tags from all messages). The
function produces an alphabetically sorted list.
To add support for the new function, we rip the guts off of
notmuch_message_get_tags and put them in a new generic function
called _notmuch_convert_tags. The generic function takes a
Xapian::TermIterator as argument and uses the iterator to find tags.
This makes the function usable with different Xapian objects.
Function notmuch_message_get_tags is then reimplemented to call the
generic function with message->doc.termlist_begin() as argument.
Similarly, we implement notmuch_message_database_get_all_tags, the
function calls the generic function with db->xapian_db->allterms_begin()
as argument.
Finally, notmuch_database_get_all_tags is exported through
lib/notmuch.h
Signed-off-by: Jan Janak <jan@ryngle.com>
Xapian provides an interator-based interface to all search results.
So it was natural to make notmuch_messages_t be iterator-based as
well. Which we did originally.
But we ran into a problem when we added two APIs, (_get_replies and
_get_toplevel_messages), that want to return a messages iterator
that's *not* based on a Xapian search result. My original compromise
was to use notmuch_message_list_t as the basis for all returned
messages iterators in the public interface.
This had the problem of introducing extra latency at the beginning
of a search for messages, (the call would block while iterating over
all results from Xapian, converting to a message list).
In this commit, we remove that initial conversion and instead provide
two alternate implementations of notmuch_messages_t (one on top of a
Xapian iterator and one on top of a message list).
With this change, I tested a "notmuch search" returning *many* results
as previously taking about 7 seconds before results started appearing,
and now taking only 2 seconds.
Previously, notmuch_query_search_threads would do all the work, so the
caller would block until all results were processed. Now, we do the
work as we go, as the caller iterates with notmuch_threads_next. This
means that once results start coming back from "notmuch search" they
just keep continually streaming.
There's still some initial blocking before the first results appear
because the notmuch_messages_t object has the same bug (for now).
This was a poor workaround around the fact that the existing
notmuch_threads_t object is implemented poorly. It's got a fine
iterartor-based interface, but the implementation does all of the
work up-front in _create rather than doing the work incrementally
while iterating.
So to start fixing this, first get rid of all the hacks we had working
around this. This drops the --first and --max-threads options from the
search command, (but hopefully nobody was using them
anyway---notmuch.el certainly wasn't).
The rudimentary aspect here is that the date ranges are specified with
UNIX timestamp values (number of seconds since 1970-01-01 UTC). One
thing that can help here is using the date program to determins
timestamps, such as:
$(date +%s -d 2009-10-01)..$(date +%s)
Long-term, we'll probably need to do our own query parsing to be able
to support directly-specified dates and also relative expressions like
"since:'2 months ago'".
Getting the count of matching threads or messages is a fairly
expensive operation. Xapian provides a very efficient mechanism that
returns an approximate value, so use that for this new command.
This returns the number of matching messages, not threads, as that is
cheap to compute.
Signed-off-by: Keith Packard <keithp@keithp.com>
I configured my database.path with a trailing /, and after running notmuch
new every notmuch search would fail with error messages like this:
Error opening /inbox/cur/1258565257.000211.mbox:2,S: No such file or directory
The actual bug was in the filename normalization for storage in the
database. The database.path was removed from the full filename, but if
the database.path from the config file contained a trailing /, the
relative file name would retain an extra leading /... which made it look
like an absolute path after it was read out from the DB.
Signed-off-by: Bart Trojanowski <bart@jukie.net>
Use the facilities of GNU make to create a magic function that will
on the first invocation print a description of how to enable verbose
compile lines and then print the quiet rule.
Signed-off-by: Chris Wilson <chris@chris-wilson.co.uk>
Signed-off-by: Carl Worth <cworth@cworth.org>
Cc: Mikhail Gusarov <dottedmag@dottedmag.net>
[ickle: Rebased, and duplicate command string eliminated.]
[ickle: Fixed verbose bug pointed out by Mikhail]
Since Xapian has a limit on the maximum length of a term, we have
to check for that before trying to add the message ID as a term.
This fixes the bug reported by Mike Hommey here:
<20091120132625.GA19246@glandium.org>
I've also constructed 20 files with a range of message ID lengths
centered around the Xapian term-length limit which I'll use to seed a
new test suite soon.
If an earlier exception occurred, then it's not unexpected for the
flush to fail as well. So in that case, we'll silently catch the
exception. Otherwise, make some noise about things going wrong at the
time of flush.
